Nicotiana tabacum (common tobacco): 107798403
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Entry
107798403 CDS
T04643
Name
(RefSeq) cleavage stimulation factor subunit 77-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107798403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107798403
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107798403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_16
TPR_2
Motif
Other DBs
NCBI-GeneID:
107798403
NCBI-ProteinID:
XP_016476868
UniProt:
A0A1S4AKC4
LinkDB
All DBs
Position
Un
AA seq
760 aa
AA seq
DB search
MTEKYNVEAAEILANEALRLPISEAVPIYEQLLSTFPTAAKYWKQYVEAHMTVNNDDATK
QIFSRCLLNCLQIPLWRCYIRFIRKVNDKRGNEGQEETRKAFDFMLNYVGADIASGPVWM
EYIAFLRSSPAQTTQEESQRMTSVRKAYQRAIVTPTHHVEQLWRDYENFENSISRALAKG
LVSEYQPKYNSARAVYRERKKYIDEIDWNMLAIPPSGTSKEEMQWMAWKRLLAFEKANPQ
RIDSASANKRIVFTYEQCLMHLYHYPDIWYEYATWHAKAGSIDSAIKVFQRALKALPDMV
MLNLRNHVEPFRLLKKYMKIFWGMDPMPQHCHISKHHTILHLDNSLVSGTLLSLSSMIFI
RFLRRSEGVEAARKYFLDARKSPNCTYHVYVAHAMMAFCLDKDAKMAHNVFEAGLKRFMH
EPGYILEYADFLYRLNDDRNIRALFERALSSLPPEESVEVWKKFTQFEQTYGDLASMLKV
EQRRKEALFRTGDDGTSELESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKT
DKPTLGIEAGSADKISSGVSSNTNPLAKVVYPDTSKMTIYDPRQMSGPAALAVPSASGTL
PYSGTPFSSGGPPNALNDILKSLPPAFAAFMTNLPAVEGPTPDADFVISVCLQSNIPLAT
GKSGTASLPLQSGPAPCTSDISDSSKFRSRDRQPGKRKDMDRQEDDESSTVQSQPLPRDV
FKIRQLQKTRVASSSRVTSSYTGSASYGSALSGDLSGSTG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaagtataatgttgaagctgcagaaattcttgctaacgaggcactgcgcttg
ccaatttcagaagcagtgccgatatatgagcaacttctgtccacgtttcccactgcggca
aaatactggaagcaatatgtcgaggcacacatgacggtaaataatgatgatgcaacaaag
caaatatttagtcgctgcctcttgaactgtctacagattcctctttggcgctgttacatc
cgctttatccggaaagtcaatgacaagagggggaatgagggtcaagaagagacaagaaag
gcttttgatttcatgcttaactatgttggagcagacattgcatctggtccagtgtggatg
gaatacattgcatttttaaggtcttcgcctgctcaaaccacgcaagaagaatcacaacga
atgacctctgtgaggaaagcataccaaagagctattgttaccccaacccatcacgtggaa
cagctttggagggactatgagaattttgaaaattcaattagtcgagccttggcaaaaggg
ctggtgtctgaataccaaccaaaatataacagtgcgagggctgtatacagagaaaggaag
aagtacattgatgaaattgattggaatatgctagcgattccaccttccggcacttccaag
gaggaaatgcaatggatggcatggaaaagacttctagcatttgagaaagcaaaccctcag
aggatagacagtgcttctgctaataaaagaattgtgttcacatatgagcagtgcctcatg
catttgtatcattatcctgacatatggtatgaatatgccacatggcatgcaaaagctggt
tcaatagactctgctatcaaggttttccagcgagctcttaaagctcttcctgatatggtt
atgctgaacttgaggaatcacgtggagccattcaggctgctaaaaaagtatatgaaaatc
ttctgggggatggatccaatgcctcagcactgtcacatatccaagcaccatactattctg
catctggataattcgctggtctctggcactctgctatcgttatcatctatgatctttata
aggtttttaagaagaagtgaaggagttgaagcagctcgcaaatactttcttgatgcacgg
aaatctccaaattgcacttaccatgtctatgtagctcacgcgatgatggctttttgtctt
gacaaggatgcaaagatggcgcacaatgtttttgaagcagggttgaaacgctttatgcat
gagcctggatacatccttgagtatgcagatttcctttatcgtttgaatgacgatagaaac
atcagagcattatttgaacgtgcattgagctcactccccccagaggaatctgttgaggtt
tggaaaaaattcactcaatttgagcaaacgtatggagatcttgccagcatgttgaaggtt
gagcagagaaggaaagaagctcttttcagaacaggtgatgatggaacatcagagttagag
agttcgttacaagatgttgtatcacgctacagtttcatggatctgtggccttgctcttca
aatgacttggatcatttagcacgccaagagtggctcgcgaggaacatcaacaaaaaaact
gacaaacctactcttggtattgaggcaggttctgcagataagatttcttctggtgtttcg
tccaacacaaatccccttgccaaggttgtgtatccagatacttcaaaaatgacaatttat
gacccaaggcaaatgtcaggtcctgctgctcttgcagttccatccgcttcaggcaccttg
ccttattctggtactccatttagcagtggtggaccacctaatgctcttaatgatattctg
aaatcgttgccccctgcatttgcagcgttcatgacaaatttgccagctgttgaaggtcct
actcctgatgctgattttgtgatatccgtatgtttgcaaagcaacattcctttagcaacc
ggaaaatcaggaaccgcctctctgccgttgcagtcaggccctgctccatgtacgagtgac
atctctgattcaagcaaattcaggtcgagagacagacagcctggaaagaggaaagacatg
gacaggcaagaggatgatgaatcgtcgactgtacaaagccagccccttcctagagatgtt
ttcaagattcgccaattacagaaaacccgtgttgctagttcgtctcgagttactagttca
tacactggatcggcgtcgtatggcagtgctctttctggagacctctcgggcagcactggt
tga
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