Nicotiana tabacum (common tobacco): 107798809 Help Entry 107798809         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107798809   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism nta  Nicotiana tabacum (common tobacco) Brite KEGG Orthology (KO) [BR:nta00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nta04131]     107798809 Membrane trafficking [BR:nta04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     107798809 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps62 VPS13_VAB VPS13_C VPS13_M Pex24p C2 Motif Other DBs NCBI-GeneID:  107798809 NCBI-ProteinID:  XP_016477331 UniProt:  A0A1S4AL00 LinkDB All DBs Position Un AA seq 2724 aa AA seqDB search MSDKEYNVILDCFYMNFSENPTLPPSFRSSTSASKDTIKMLADKVNVNSQILLSRTVTIM AVEVGYALLELWNDTHAGSCLAHVALEGLWVSYRMTSLCEADLYITIPKFSVLDIRPDTK PEMRLMLGSCIDAHSQNSPETDVGFPTSTMFVMDCRWRLSSQSFVLRIQQPRILVVPDFL LSVCEYFVPSLGALTGREEIMDPKNDPISKNNSIILSAPLYEQKEDLVLLSPNRQLVADA VGIDEYTYDGCGKTLRLTDKVEVKGIHSSGIQHIIIIGRGKRLRFVNVKIENGLLLRRYT YLSNESSYLVCQEDGVDVMFSDSNSDNDENGMKSMEELLYNSDASDFDPNGSSKIQSFSF EAQVVSPEFTFYDSSKSSLDDFAHCEKLLRAKMDLNFMYAAKESDTWIRGLVKDLTVEAG SGLIIIDPVDISGGYTSVKDKTNISLLSTDICAHLSLGVVSLLLNLQSQATTALHFGSAD PLLPCTQFDRIWVCPKEHGRLNNLTFWRPRAPSNYVILGDCVTSRPNPPSQAVVAVSNTY GRVRKPLGFRLIGLFSDIQGSEKVQDADDCSLWLPIAPPGYVTMGCVAHIGAQPPPNHIV HCIRSDLVTSMMLLECIFSVAANTAFTSGFGIWRLDNALGSFYAHPSSSHPHKSCCFDLN NLLLLSSSWYNSSLKVPTVDLTRESEHLHLQTSKQSATSSGWDIIRSISKATSCYISTPN FERIWWDRGSDLRPAVSIWRPIRRPCYAVLGDCITEGLEPPPLGIIFKADNPELSAKPVQ FTKVAHIAGKGLEEAFFWYPVAPPGYAALGCVVTRSNEAPDLDYFCCPRMDLVSQANVLE MPISRSSGSRASQCWSIWKVDNQACTFLARSDLKKPSSRLAFTLGDSVKPKTRDNITADM KIRCFSVTLLDSLCGMVTPLFDATITNIKLATHGRLEAMNAVLISSMAASTFNTQLEAWE PLVEPFDGIFKFETYETNLHPPSRVGTRVRVAATSILNINLSAANLDVLGQAVESWRKQR ELEKKAIKIKEARSGNAHQDNTSFVALDDDDFRTVVVENKLGCDMYLKKVEQNSDVFELL PPDNSVSVWIPPTRHSDRLNVANESREPRRYAAVQIVEAKGLPVNDDGNSHNFFCALRLV VENQDSNQQKLFPQSARTKCVKPLITRKNNVDEGTTKWNELFIFEVPLKGLAKLEVEVTN LSAKAGKGEVVGASSFSVAHGPSILKKVASLRMLHQVSDVENFGCYPLRRRYDFQGQLNS NETNSCGCLFVSTSYFEKKIVLNFENDEGEKSGASDTGFWVGLTPKGPWESIRSFLPLSV VTKTLGDDFVALEVVTKNGKKHIIFRALATVTNDSDITLDISPCHESMIHTQDLSSEGRN YSIFVEEIFENQRNHPVSGGNDPGRWSTRDYAYSSNDFFEPTLPPGWKWISSWTVDKSQF VDIDGWAYGPDFQTLKWPPNSSKCSTKSAHNTVRRRRWTRTRQQVKERGANNTDHIVTSP GSSAILPWRCMSKDSNHCLQVRPPWLFSXRLDYSQTPYSWGHPIAVGSVFGLGKDQTSIE SSALSRQNTVRQGNKIPISALKLNQLEKMDLLLCCPGGSGKQLWLCVGTDASVLHTELNA PVYDWKLSISSPLKLENRLPCGADFTIWEKLKDGNTVERHRGFMSSRETVHIYSADVRNP IYLMLFVQGGWVMEKDPVLILDLTSNNHASSFSMVHQQRKRRLRISVERDIGGTTAAPKT IRFFVPYWISNDSFLFLAYQVVEIEPLESSDVDSLSLSRAVKSAKLALKTPPTSVLSRQI GARKNIQVLEVIEDSSPTPSMLSPQHYVGRGGVMLFSSRNDAYLSSRVGIAVALQNSENF SSGISLLELEKKQRVDVKAFGADGFYYKLAVVLRMTSDRTKVVHFQPHSLFINRVGCSVC LRQCDSQSVEWIHPSDPPKHFSWQSTKVELLKLRLDGYDWSAPFSVDSEGVMCICLKDQI TDNLMHLKVEVRSGTKSSRYEVILRPNSFTSPYRVENRSLFLPIRFRQVDGANNSWKFLP PNASASFSWEDLGRRRLLEVLIDGSDPAASLIYNIDEICDHQPIHVSGGPEKALHVIIQK EEKVNVVKISDWMPESATYAILNRNPSLLPSSGTSSVSQQTLSNTESEFHFIVEVAELGL SVIDHTPEEILYLSVQNLVLSYSTGLGSGVSRLKVRMRGIQVDNQLPLTPTPVLFRPQRV GQENDYVLKFSLTQQSNGSLDLCVYPYIGFQGPENSAFLIKIHEPIIWRLHGMIQQTNLS RLYNTETTSVSVDPIIQIGVLNISEVRLKVSMIMSPTQRPVGVLGFWASLMTALGNTENM TVRINQRFVENVCMRHSVMIGSAIANIKKDLLSQPLQLLSGLDILGNASSALGHMSKGVA ALSMDKKFIQSRQKQESKGVEDFGDVIREGGGAFAKGLFRGVTGILTKPLEGAKASGVEG FVQGVGKGLIGAAAQPVSGVLDLLSKTTEGANAMRMKIASAIASEDQLLRRRLPRVISGD NLVRPYDEFKSQGQAILQLAESGSFFGQVDLFKVRAKFALTDAYEDHFMLPKGRIILVTH RRVILLQQPSNLIAQKKFNPARDPCSVLWDVLLEDLVTMELTHGKKDLPNGPPSRLIMYL QSRSLEGKDQVRVIKCHRESNQAFEVYSSIEQARNVYGQSQSKALVKTKMTRPYSPIADV ASAEGICTWSPQQMPASTFGSSEQ NT seq 8175 nt NT seq  +upstreamnt  +downstreamnt atgtcagataaagaatataatgtcattcttgattgtttctacatgaatttctctgagaac ccaacacttccacctagtttccgcagcagcacatctgcttcaaaagatacaataaaaatg ctggctgataaagtgaacgtgaacagtcaaatactcctatcacgaacggttaccataatg gctgtggaagtgggctatgccttgctggagttgtggaacgacactcatgcggggtcatgc ttggctcatgttgcgcttgaaggtctttgggtgtcgtaccgaatgacatcattatgtgag gcggacctttacataactatcccaaagttctctgttttagatattcgcccagatacaaag cctgaaatgaggctgatgcttgggtcgtgcattgatgctcattcacagaactctcctgaa actgatgttggatttccaacttcaacaatgtttgtgatggactgcagatggagattgtca tctcaatcatttgttcttcggatacagcagcctcgcattcttgttgtaccagactttcta ctatctgtttgtgagtattttgtgccatctttgggagcgctaactggtagagaggagatc atggatcccaagaatgatcctattagcaaaaacaacagcataatactctctgctcctctt tacgagcagaaagaggatctagtattattatctcccaatagacagctagttgcggatgct gtagggattgatgagtacacgtatgatggttgtggaaaaacactacgcctgaccgataag gtggaagtgaaagggatccattcatcaggaattcaacatatcatcattattggacgtggc aagaggctgagatttgtcaatgtgaaaattgagaatggtttgcttttaaggagatatact tacctgagcaacgaaagcagctatttggtctgccaagaggatggtgtggacgtaatgttt tctgacagtaattctgacaatgatgaaaatggtatgaagtccatggaagaattgttatat aattcagatgcttccgattttgaccctaatggatctagtaaaatacaaagcttcagtttc gaggctcaggttgtctctcctgaattcacattttatgatagtagtaaatcatctttggat gactttgctcattgtgagaagctcctccgggcgaaaatggaccttaacttcatgtatgca gctaaagaaagtgatacatggatccggggacttgtaaaggatttaactgttgaggctggc tctggtcttattattattgacccagttgatatatctggaggatatacttctgtgaaggat aaaacgaacatatcattattgtcaacggatatatgtgcccacctatctcttggtgttgtc tcccttttactcaatttgcagagtcaggcaaccactgctttacattttgggagtgctgat cccctgttgccttgtactcagtttgacagaatttgggtttgtcccaaagagcatgggcgt cttaacaaccttacattctggaggcccagagcaccgtcgaactatgttattctgggagat tgtgtcacatcaagaccaaatcctccatcacaagctgttgtcgctgtgagcaatacatat gggcgtgttaggaagccccttggtttcaggctgataggtttattttctgatattcaagga tctgagaaggtacaagatgctgatgattgttctctttggctgcctattgcaccgcctgga tatgtcacaatgggttgtgttgctcatataggagcacaaccacctcctaatcacatagtt cattgcatacgttctgatttggtaacatcaatgatgcttttggaatgtatctttagcgtt gctgctaatactgcattcacatcaggtttcggtatttggcgtttggataatgctcttggg tcattctatgcccatccatctagtagtcatcctcataaaagctgttgttttgatctgaat aatcttcttcttctgagctcaagttggtataattcttccttaaaagtacctactgtagat ttaactagggagagcgagcacctgcatctccagacaagtaaacagagtgcaacttcatca ggatgggacattatcagatcaatttctaaagcgacctcttgttatatttcaactccaaac tttgagcggatctggtgggacaggggtagtgatcttcgccctgcagtctctatatggaga cctataagacgtccttgttatgcagtactgggtgactgtattaccgaaggcttagaacca cctccccttggtataatctttaaggctgacaaccctgaactttctgcaaagcctgtgcaa tttacaaaagttgctcatattgcgggcaagggactggaggaagctttcttctggtacccg gttgctcctcctggttatgctgctttgggttgtgtagtgacacgtagcaatgaagcacct gatctggattatttttgctgcccaaggatggatcttgttagtcaagctaatgttcttgag atgcccatttcaagatcttcaggctccagagcttctcagtgctggagcatttggaaagtt gacaatcaggcttgcacgttccttgcacgctctgatctgaaaaaaccttccagtagattg gcatttactcttggtgattcagtgaagccaaagacaagggacaacataacagctgacatg aaaatcagatgcttttctgtgactctattggacagcttatgcggaatggtaacacctctt tttgatgcaacaattactaatattaagcttgcaacacatgggcgactagaggcaatgaat gctgttctcatttcttcaatggctgcttccaccttcaacacgcaattagaagcgtgggag ccacttgttgagccttttgatggaatatttaagtttgagacttatgagaccaatttacat ccgccttcaagagttggtacaagggtaagagttgctgcaaccagcattttgaacataaat ctgagtgcagcaaatcttgatgtattggggcaagctgtcgagtcatggcgaaagcagaga gaactggaaaagaaagcaattaagattaaggaagctcgttctgggaatgcacatcaagat aatactagttttgtggcactggatgacgacgattttcggacggtggtggtcgaaaataaa cttgggtgtgacatgtacctgaaaaaagttgagcaaaactcagacgtatttgagttacta cctcctgataattctgtttctgtatggattccacctacaaggcattctgacagattaaat gttgccaatgagtcaagggaacctcgacgttatgctgctgtgcagatagttgaagccaag ggtctgcctgtcaatgatgacggcaatagccataacttcttctgcgctttgcgcttggtt gtggagaatcaggattcaaatcaacaaaagctttttcctcagagtgcaaggacgaaatgt gtgaagccactaattactagaaaaaataacgtggatgaaggcaccactaaatggaatgaa ctcttcatatttgaagttcctttgaaggggctggcaaagctggaagtggaggtgacaaac ctttctgcaaaggccggaaaaggtgaggttgttggcgcatcgtccttttccgttgcacat ggtccaagtattctaaagaaggttgcttcactcagaatgctgcatcaagtgtctgacgtt gaaaactttggatgttatcctctaagaagaaggtatgatttccagggccaacttaacagt aatgagacaaattcttgtggctgcctttttgtctcaacgtcttactttgagaagaaaata gtattaaacttcgaaaatgatgagggagaaaagagtggtgctagtgatacagggttttgg gtaggacttacacctaaaggtccatgggagagcatccgctccttcctaccgctatcagtg gtcaccaaaacattgggagatgattttgtggctttagaggttgtcaccaaaaatggaaaa aagcacataatttttcgggcacttgctacagttacgaatgattcagatatcacattggat atttcgccatgtcacgagtccatgattcatactcaggatctatcttcagaaggtagaaat tatagcatatttgttgaggagatttttgagaatcaacgcaatcatccagtttctggtgga aatgacccagggcggtggagcactagggattatgcctattcctcaaatgacttttttgaa cctaccctgcctcctggatggaaatggatatcgtcttggacggttgacaaatctcagttt gttgacattgatggatgggcatatggacctgattttcaaaccttgaagtggccaccaaat tcttccaagtgtagcacaaagtcggctcacaatactgttcgtcgaagacgttggactcgt acaaggcagcaagttaaggagaggggtgcaaataacacagatcacattgttactagtcct ggttcttcggctatcttaccttggagatgcatgtccaaggactctaaccactgtttacaa gttcgtccaccttggttattctcagancgccttgattattctcagactccttattcgtgg ggtcatcctattgctgtgggctctgtctttggcttgggtaaggaccaaacatctatcgaa agcagtgcactttctcgacaaaatactgtaaggcagggaaacaaaatacctatttctgca ttgaagctaaaccagcttgagaaaatggatctacttttatgttgtcctggtggcagtggt aaacagctttggctctgtgttggtacagatgcctctgttcttcacacagagctaaatgcc ccagtttatgattggaaactatcaattagttctcccttgaaattggagaatcggcttcct tgtggagctgacttcacgatctgggaaaaactgaaagatggcaacactgtagagcgacat cggggttttatgtcatcccgggagaccgtgcacatatattctgcggatgtgcgcaatcct atatatctgatgttatttgttcaaggtggttgggttatggaaaaggaccccgtactcatc ttggatcttacgagtaacaatcatgcttcttcattttctatggttcaccaacaaagaaaa aggaggttgcggattagtgttgaacgtgacataggaggaactactgctgctcctaaaacc atacggttctttgttccatattggattagcaatgactcattcttgtttttggcttatcaa gttgtggaaattgagccattggaaagctcagatgtagattcactttcactttccagagct gttaaatcagctaaactagcattgaaaactccccctacttcagtgctcagtagacagata ggtgcaaggaaaaacattcaagtacttgaagttattgaagattccagtccaacacccagc atgctttctccacaacactatgttggccgcggtggtgtcatgttgttttcatcgcgtaat gatgcctatctttcatcacgggttggcattgctgtggctcttcaaaattctgagaatttc agttctgggatatctcttcttgagctggaaaagaagcaacgtgttgacgtcaaggccttt ggtgcggatggattttattacaagcttgcggtggtactgcgcatgacttcagacagaaca aaggtcgtccattttcaaccacatagcttatttatcaatagggttggatgtagtgtgtgc ctgcgtcagtgtgattctcagtcagtggaatggattcatccttcagatcctccaaaacat ttttcatggcagtctactaaagtggaacttttaaagttgcggcttgatggatatgattgg agtgcaccatttagtgttgatagtgaaggtgttatgtgtatttgcttgaaagatcagatc actgataacctaatgcatctcaaggttgaagtgaggagcggaacaaaaagttcacgctat gaagtcatacttcgtcccaattctttcaccagtccttacagggtcgaaaaccgctcattg tttttacctatacgtttccggcaagtggatggtgctaataattcatggaaatttcttcct cccaatgcctcagcttccttttcttgggaagatcttggtcgaagacgattgttggaggtc ttgattgatggatctgatcctgcagcatcactgatttataatattgatgagatatgtgat catcagcccatccatgtctctggaggacctgagaaagctttacatgtcattatccaaaaa gaagagaaagttaatgtagtcaaaatcagtgattggatgcctgaaagtgcaacctacgct attttgaatagaaatccttctttattaccctcttctggaactagttctgtgtctcagcaa acactttctaacacagagagtgaattccatttcattgttgaggtcgcagagcttggatta tcagttattgatcatacaccagaagagatattatatctgtcagtccagaatcttgtgctc tcatattcaacaggattggggtctggagtcagccggttaaaagtaagaatgaggggtatt caagtggacaatcaattgcctttaactccaaccccagtactcttcaggccgcagagagtt ggacaagagaacgattatgttttgaaattttcactgacgcagcaatctaatggatcatta gatctatgtgtatatccatacataggtttccaaggacctgaaaattctgcctttctaatt aagattcatgagccaataatttggcgactgcatgggatgattcagcaaaccaatctaagt cgattgtacaatacagaaactacttcagtctctgttgatcccataatacagattggtgtt ctcaacatatccgaggtccgcctgaaggtttctatgatcatgtccccaacacaaaggcca gtgggtgttctagggttttgggctagtctgatgactgcgcttggaaacactgaaaatatg actgtccggataaaccaaagatttgtggaaaatgtatgcatgaggcatagtgttatgatt ggtagtgctatcgcgaacattaagaaggatcttcttagccaacctctccagctactgtct ggtcttgatatattaggcaatgccagtagcgcacttggacacatgagtaaaggtgttgct gcgttatcaatggataagaaatttattcaaagccgacagaaacaggagagcaaaggtgtg gaggactttggtgatgttattagagaaggtggaggagcatttgcaaagggtctctttcga ggtgtcactggaattttaaccaaacccttggaaggtgccaaagcttcaggagttgagggt ttcgtacagggtgtggggaaagggttaattggtgctgctgctcaacctgttagtggtgtc ttggatcttttgtcaaaaacaactgaaggtgccaatgctatgagaatgaaaatagcatct gctattgcttctgaagatcaactccttcgaaggaggctgcctcgagtgataagtggtgat aatcttgttcgaccctatgatgagtttaaatcacaaggacaggcaatcttgcaactagca gaatctggatcattttttggccaggttgacctttttaaagtacgtgcgaagtttgccttg accgatgcctatgaagaccatttcatgctacctaaaggaaggataattcttgttactcac cggagggttattctgttgcaacaaccttcaaatcttattgcacaaaagaagtttaatccg gctagagatccatgttcagttttatgggatgtcctgttggaagacctggtgactatggaa ttgactcatggaaaaaaagatcttccaaatggtcccccttcacggcttataatgtatcta caaagtcgttctctggagggaaaggaccaggttcgtgtcataaagtgtcatcgtgaatct aatcaagcatttgaagtttattcttctatcgagcaagcaagaaatgtttatggacaaagt caatcaaaggcattggttaaaacaaaaatgactagaccatattctcctatcgctgatgtg gccagcgctgaaggaatttgcacctggtctcctcaacagatgcctgcttcgacttttgga agcagtgagcaatga

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