Nicotiana tabacum (common tobacco): 107799110
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Entry
107799110 CDS
T04643
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107799110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107799110
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
SR proteins
107799110
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107799110
NCBI-ProteinID:
XP_016477666
UniProt:
A0A1S4AM29
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All DBs
Position
24:complement(57044886..57057474)
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AA seq
289 aa
AA seq
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MSGRFSRTIYVGNLPADIKEWEVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPPSSSDRRGGYGRSDGGGRHGISRHSEYRVIVRGL
PSSASWQDLKDHMRKAGDVCFSEVSRDSEGTFGLVDYTHYDDMKYAIRKLDDTEFKNPWT
RTYIRVREHKRSPSRSRSRSRSRSPRGSRSRSRSRSRIPKRRSKSAGRSVLRSPPAKSRS
ASPVKSTRPRSRSKSKSKSRLRSASPRQTIVDGYLNRRFCSCLNHSDVS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtttttctcgcacaatctatgttggcaaccttcccgcagatataaaagaa
tgggaagttgaagatctattctacaagtatgggcgtatactggatgttgagttgaagatt
cccccgcgtcctccttgctattgctttgtagagtttgaaaatgctcgtgatgctgaagat
gctatcaggggtagagacggctacaactttgatggctgtcgtctgcgggttgagcttgct
catggtggtagagggccgccatcttcaagtgatcgtcgtggtggctatggccgcagtgat
ggtggagggcgtcatggcatttctcgccattctgagtatcgagttattgttcgtggcctc
ccatcttctgcttcctggcaagatttgaaggatcatatgcgaaaggctggcgatgtttgc
ttttctgaagtttcccgtgacagtgaaggaacctttggcctggttgactatacacactat
gatgacatgaaatatgctattcgcaaacttgatgatacagagttcaaaaatccttggaca
cgaacctatatccgggtaagagaacacaagcgaagtccatccagaagccgcagcaggagc
aggagcagaagtccgagggggagcagaagcagaagcagaagcagaagcagaattccgaag
aggaggagcaaatcagctggaagatctgttttgagatcaccgccggcgaagtctagatct
gcatctcctgtgaagtcgactagacccaggtccaggtccaagtccaagtccaagtccaga
ttaaggtcggcgtcccctcgtcagaccatcgtggatggatatttgaatcgtcgcttctgc
tcatgccttaatcattctgatgttagctaa
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