Nicotiana tabacum (common tobacco): 107799409
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Entry
107799409 CDS
T04643
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107799409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107799409
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107799409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
WD40_like
Beta-prop_TEP1_2nd
DUF7165
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
107799409
NCBI-ProteinID:
XP_016478004
UniProt:
A0A1S4AMZ6
LinkDB
All DBs
Position
Un
AA seq
553 aa
AA seq
DB search
MASLISQNASRTVGVEKSKRKAKKEVSEKESNGKRKKEQNEEDNELEVEQEREMKKLENL
LFGSLYNPVGFGKDDEEEKRDDGENSSAMFFVDRLADSALSVYEGDEQLVQEGIHVVGKE
ERKPVWIDDEEEKTSIKIASVNRLRKLRKEEGEDVISGSTYVARLRAQHAKLNPGTEWAQ
IDSQGRSYSSDDEDSDEESKHTEGYGSKNVKLVGDILQSNEDLVVKSRTKLLPGLLEYSR
LVDANAADPSNAPVNSVQFHRNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFLEDFPIRK
ASFLPNGSQVIISGRRKFFHVLDLVKASVDKIGPLVGREEKSLESFEVSPDSDTIAFLGN
EGYILLVSSKTKELIGTLKMNGTVRSVAFTNDGQQLLSSGEDGQIYHWDLRTRTCIHKGV
DEGSINGTALCTSPNGGLFAAGSDSGIVNIYNREEFLGGKRKPIKAIENLTTKVDFMKFN
HDAQILAISSSMKKNSSKLIHIPSFTVFSNWPSPNRAVHYPRCLDFSPHGGFMAMGNAEG
KVLLYKLHHYHDA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttgatatcacagaatgcttctcgtacagtcggggttgaaaagtctaaaagg
aaggctaagaaggaagtaagtgagaaagaaagtaatgggaagagaaagaaagagcagaat
gaagaggataatgaattagaagtcgagcaggagagggaaatgaagaagcttgagaacttg
ttgtttggctccttgtacaaccccgttgggttcgggaaggacgatgaagaagaaaagaga
gatgatggcgaaaacagttctgctatgttctttgtggaccggttagcggatagtgcattg
tctgtttatgagggggatgaacagttagtgcaagaaggtatccacgttgtgggaaaggag
gagcggaaacctgtgtggatagatgacgaagaagagaagactagtatcaaaatagcaagt
gtgaacagattgaggaagctgaggaaagaagagggagaggatgtcatatctggttccacg
tacgtggcgagactaagggcccaacacgctaaacttaatccaggcactgaatgggcccaa
attgattctcaaggcagaagctacagttctgatgatgaagattctgacgaggaaagtaaa
catactgagggctacggttcaaagaatgtcaagttggtcggtgatattcttcaatcaaat
gaagatcttgttgtcaaaagtcgcaccaagttgttacctgggcttcttgaatattcgaga
ctggttgatgcaaatgcagctgatccttcaaatgcaccagtaaattctgttcagttccac
aggaattctcagttgctccttgttggtggattggataaaaaactcagattttttcagatt
gacgggaaacgaaatacaaagatacagagcatctttcttgaggattttcctattagaaag
gcatctttcttacccaatggatctcaagttattatatcaggaagaagaaaattcttccat
gtcttagacttggtcaaagcaagtgtagataaaataggtcctctagttggcagggaagaa
aagagcctggaaagttttgaggtatctcctgattcagatacaattgcttttcttggtaat
gaaggatacattttgctagtttcctccaaaacaaaggagctaattgggacactgaaaatg
aatggaactgttcgctcagtggctttcaccaatgatggacaacaattattgagctctggt
gaagacgggcagatttaccattgggatttgagaacaagaacatgcattcataaaggtgtt
gatgaagggtccataaatggtacggctctttgcacttcaccaaatggtggtttgtttgct
gctggttcagacagtgggatagtaaatatttataacagagaagagtttttggggggaaag
agaaaaccaatcaaggcgattgagaatctcaccacgaaagtggattttatgaaatttaat
catgatgctcaaatattagccatcagttctagcatgaagaaaaacagctcaaagctaatt
cacattccatcatttacagttttttcaaactggccttctccaaatcgagccgtgcactat
cctcgctgtttggattttagtcctcatggaggattcatggctatgggaaatgctgaagga
aaagtgttactgtacaagttgcatcactaccatgatgcatag
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