Nicotiana tabacum (common tobacco): 107799898
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Entry
107799898 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107799898
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107799898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
DUF3587
Motif
Other DBs
NCBI-GeneID:
107799898
NCBI-ProteinID:
XP_016478513
UniProt:
A0A1S4APU1
LinkDB
All DBs
Position
Un
AA seq
443 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQGVPSAVNALQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNSQGRGDEPNRILLVTIHHVLYPITVEVLHQV
FSPHGIVEKIVTFQKSAGFQALIQYQLPQNAVSARNSLQGRNIYDGCCQLDVQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSPQGYGDAGGMYSLQGSGPRGVGFPQMGNAAAIAAA
FPGGLPPGISGTNDRCTVIVSNLNPDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQM
GDGFQAELVVHFLKGALLFGTRLEVNYSKHPNIITGPDTHDYSNSNLNRFNRNAAKNYRY
CCSPTKMIHLSSLPQDVTEEEIVAHMEEHGTIVGTKLFEMNGKKQALVLFENEEQATEAL
VCKHATSLGGSIIRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccttcaaaggtcattcacgttcgcaacgtgggccacgagatctctgagaat
gacttgcttcagctatttcaacccttcggcgtcattaccaaacttgtaatgcttagggca
aaaaatcaggctctcttgcaaatgcaaggcgttccatctgctgtaaatgcattacagttc
tattcaaatgttcaacccagcatcagggggagaaatgtttatgtacaattctcatctcat
caagaactgacaaccatggatcagaactcccaagggcgaggagacgagcctaatcgaatt
ctcttagttacgatacatcacgtgctatatcctataactgtggaagtgctgcatcaagtg
ttttcacctcatggaattgttgaaaagatcgtgacatttcagaagtcggctggttttcaa
gctttgattcagtaccaattaccccagaatgctgtttctgctaggaactctctccagggg
cgtaatatatatgatggttgttgtcagcttgatgtacaattctcaaacctagatgaattg
caagtgaactacaataatgaacgctcgagggacttcaccaacccaaatctaccatcagaa
cagaagggcaaatctcctcaaggatatggagatgcaggaggcatgtactccttgcaaggt
tccgggcctcgtggagttggatttcctcagatgggaaatgctgcagcaattgcagctgcc
tttcctggtggtttgcctcctggcataagcgggacaaatgacaggtgtactgttattgta
tctaatttaaatccagatagaatagacgaggacaagctttttaatctgttctccatttat
ggaaacatcatcagaattaagctcctacggaataaaccagatcatgctctggttcagatg
ggtgatggtttccaggcagagctagttgtgcactttttgaagggtgccctgttatttggt
acgcggttggaagtcaactattcaaagcacccaaatattatcactggaccagatacacat
gactactcaaactcaaatctcaatcgttttaaccggaatgctgccaaaaactaccggtac
tgttgctcccctaccaaaatgatccacctgtcaagcctgccccaggacgtgacggaggaa
gagatcgtggcccacatggaggagcatggtaccattgtcggtacaaagctttttgaaatg
aatgggaagaagcaggctcttgttctttttgaaaatgaggagcaagcaactgaggcattg
gtgtgcaaacatgctacatcgcttggcggctcgatcattcggatttccttttctcagtta
caaaacatctga
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