KEGG   Nicotiana tabacum (common tobacco): 107799939
Entry
107799939         CDS       T04643                                 
Name
(RefSeq) RNA-binding protein squid-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107799939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107799939
   03041 Spliceosome [BR:nta03041]
    107799939
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107799939
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107799939
Spliceosome [BR:nta03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107799939
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35
Other DBs
NCBI-GeneID: 107799939
NCBI-ProteinID: XP_016478563
UniProt: A0A1S4APY9
LinkDB
Position
Un
AA seq 375 aa
MDEQNGTTVNGVNIKLEEEETNDLRTTPDHQNDDVGASQPHTGDGASPGKIFIGGLARET
TSAQFVKHFGKYGEIIDSVIMKDRRTGQPRGFGFVTYADPSVVDRVIEEDHVINGKQVEI
KRTIPRGGGSSSKDFKTKKIFVGGIPTTVSEDEFKDFFLKFGEVNEHQIMRDHSTGRSRG
FGFITFDAEKSVEDILANGNRLDFAGTQVEIKKAEPKRPNAPLPAPSKRQGHPRASFGGG
FSDAYGGYGDSGFGAGGPYRSGGPYGGRSSAFGGYSGAAMGGYGAYGGSGAYGGFREEAS
FGYSSRYDGAFGRGYDVGGGYGGPSEGYGGYAAGSGGYGAGLGGGYGGDGTGGSVYGSRG
SYGGAGSGRYHPYGR
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggacgaacagaatgggactactgtaaatggtgttaatattaagttggaggaagaagaa
acaaatgacctaagaacaactcctgaccatcaaaacgacgacgtcggcgcctctcaacct
catactggagatggtgctagtcctggaaagatatttattgggggcttggctagagagact
acttcagctcaatttgtcaagcactttggtaaatatggtgagattattgattctgtgatt
atgaaggacaggcgaacagggcagccgcgcgggtttggttttgtgacttatgctgaccct
tcagtggtggatagagtcattgaggaagaccacgttataaatggaaagcaagtggaaatc
aagcgaactatacctagaggaggaggttccagctcaaaagatttcaagacgaagaagatt
tttgtgggcggcatcccaacaacagttagtgaagatgagttcaaagacttctttttaaag
tttggagaggtgaacgagcaccagattatgcgtgaccattctactggtcgttctcgtggc
tttggattcattacttttgacgcagaaaaatctgttgaggatatcttggctaatggaaac
agacttgattttgctggaacccaggtggaaatcaagaaggctgagccgaagagacctaat
gcaccactgccagccccatccaagcgccaaggtcatccgagagcttcatttggtggtgga
ttttcagatgcttatggtggatatggagactctggctttggtgctggtggtccttatagg
tccggtggcccctatggtggtagatccagtgcatttggtggatatagtggagcggcaatg
ggtggatatggagcatatggtggcagtggtgcctatggaggctttagggaggaggcttct
tttgggtattctagccgttatgatggagcttttggtagaggttatgatgttggtggtggc
tatgggggacctagtgaaggttatggaggatatgctgccggtagcggtggatatggtgct
ggtcttggcggtggttatggaggagacggtactggaggttcagtgtatggaagtagggga
agctatggtggtgctggttccggcagatatcacccgtatgggagatag

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