Nicotiana tabacum (common tobacco): 107800451
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Entry
107800451 CDS
T04643
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107800451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107800451
03009 Ribosome biogenesis [BR:
nta03009
]
107800451
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107800451
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
U1 related factors
107800451
Complex B
107800451
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107800451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
DUF4436
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107800451
NCBI-ProteinID:
XP_016479105
UniProt:
A0A1S4ARA9
LinkDB
All DBs
Position
Un
AA seq
496 aa
AA seq
DB search
MSYVPPHLRNSSAGKTTTLNSNGAGADHFSSKLSSHQSRIHCNGELDKFSSNGYSNSSRR
SSVNYSTTSRTAIPDPEFPQWKPSERVLRLKSEQIEEIRLRLNVDVNVAPGSSSAPAPIE
SFPDMCLHPSIMKDIEKHGYTAPTSIQAQSMPVALSGRDLLGCAETGSGKTAAFSIPMIQ
HCLAQQPLQRGDGPLALVLAPTRELAQQIEQEVTAFSLSLDSFKTAIVVGGTNISEQRSE
LRAGVHIVVATPGRLIDHLQQGNTSLCRISFVVLDEADRMLDMGFEPQIREVMRNLPEKH
QTLLFSATMPTEIEALAQDYLTNPVRIKVGKVSSPTANVFQILEKVPENDKIDRLLDLLV
EEAAQSERSGHPFPLTIVFVERKTKCDEVAEALTQQGLLATALHGGRSQSEREAALRDFR
HGPINILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGRATSFYTDR
DMVFPFSIPTLSLGLF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgtacctcctcacctgagaaactcttctgccggcaaaaccaccactctgaac
agtaacggcgccggcgccgatcacttctcgtcaaaactcagctcgcatcagtccagaatt
cattgcaatggcgagctcgacaagttctcgtccaacggatactctaattcatctcgccgg
agctccgttaattactcgacgacatcgagaacggccatccctgaccctgagtttccccag
tggaagccttccgaacgtgttctccgtcttaaatccgagcagatagaagagattcgatta
aggcttaacgttgatgtaaatgttgccccaggctcaagttctgcacctgcacctattgaa
tcatttcctgatatgtgcttgcatcctagcatcatgaaggatattgaaaagcatggctac
actgcaccgacttctattcaggctcaatccatgccagttgctcttagtggaagagatctc
ttgggttgtgctgaaactggtagtgggaagactgctgcgttcagcatacctatgatacag
cactgtttggctcaacaacctcttcaacgtggtgatggacctttggcattagtgttggcg
cctacgagagagcttgcacaacaaatagagcaagaggttacggctttcagcctgtcactg
gattcctttaagaccgcaattgttgtaggtgggacaaacattagtgaacagaggtctgaa
cttcgagcaggagtacatatagtggttgctactccaggaagacttatagatcatttacag
caaggaaatacttccctctgcaggatctcgtttgttgttttggatgaggctgatagaatg
cttgatatggggtttgaacctcagataagagaggtgatgcgaaatcttccagaaaagcat
caaacactgctcttcagtgccaccatgcctacagaaattgaagcattggcacaggattac
ttgactaatccggtgcgaataaaagttggaaaagttagcagcccgactgcaaatgttttc
cagattttagagaaggtacctgaaaatgataagattgaccgacttttggatttgttggtt
gaggaggcggctcaatctgaaagatctggtcatcccttccctttgaccattgtatttgtg
gaaaggaagacgaagtgtgatgaagtagcagaagctttaacgcagcagggtttgcttgca
actgcacttcatggtggtcgtagccaaagtgaaagagaggccgcccttcgtgatttcaga
cacggtcctatcaatatcttggtcgcgactgatgttgcatctaggggattggatgtcaca
ggagttgcacatgtaattaacctagatctcccaaagaccatggaagattatgtacaccgg
attggaaggactggtcgtgcaggatcaacgggccgagctacttcattttacactgatcgt
gatatggtgtttcctttctctatacccactttgtctcttggcttgttctaa
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integrated database retrieval system
