Nicotiana tabacum (common tobacco): 107800461 Help Entry 107800461         CDS       T04643                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03440   Homologous recombination nta03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     107800461    03450 Non-homologous end-joining     107800461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nta03032]     107800461    03400 DNA repair and recombination proteins [BR:nta03400]     107800461 DNA replication proteins [BR:nta03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     107800461 DNA repair and recombination proteins [BR:nta03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      107800461     BRCA1-C complex      107800461    NHEJ (non-homologous end-joining)     MRX complex      107800461 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 AAA_15 SMC_N AAA_21 Rad50_zn_hook SbcC_Walker_B AAA_29 AAA_13 ABC_tran AAA_16 Motif Other DBs NCBI-GeneID:  107800461 NCBI-ProteinID:  XP_016479114 UniProt:  A0A1S4AR03 LinkDB All DBs Position Un AA seq 1314 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGPNGAGKTTIIECLKVACTGEMPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKATKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDKEKTESLKS QMEELEKEIQTLESKIHHAEATLKDLHQLQREIATKTAERKTLFKEQEKQYAALTEENED TDEELSEWKTKFDERIALLESKISKLEREMNDSETKSSLLKQSITDYIVEISKLQAEAEA LAVLKNERDVTIRKLFDRHNLGAVPSGPLSDDVALNLMNRIKLRLAHLDKDLQDKKESNE AEIAAAWNQYEIANNLWNEKEAQKLARADIKNGILKRIEEKENERNEFEREISNVNMAHL DEREKKMQIECERKSKQLAEREFDSNIRQKQTEMFTIDQKLKDLHAEKDRMANESEDRIK LSLKKAELETLKKKHKKLMDDNKDTVKGVLKGRLPSDKDLKKEITQAQRALQREFDDLSA KAREAEKEVNMSQMKIEEVKHNLSKYHKDMDSRRRFLESKLQLLAQEFAGVESYPKIMDS AKEKRDVQKSKYNIADGMRQMFDPFERVARAHHICPCCERPFSAEEEDEFVKKQRVKAAS SAEHIKVLAMDSSNADSRFQQLDKLRLVYEEYLKVGKESIPLAEKNLNELNEELDHKNQA LDDVLGVLAQIKAEKDAVDALIQPVETSDRLFQEIQTLQKQVDDLDYGLDIRGQGIRSME EIQSELDELQSKRENLSSEVEKLKDDRRYMENEFSSFQLRWFTVREEKTQAANKLNNVKR AEEELDDLVEQKNKVELEEKHLAEAVGPLSKEKDKHFRDYQNLKTKLSKELEEQAEIRRH YQQDVDELKKITSKIREYYELKKEQKLNELQDKRSLSESQLQNCESRKQEISAEVAKSNA LMQNQDSLRRNIEDNLNYRKTKAEVDKLTREIELLEDKVLKMGGLSTIEAELKKLSHERE KLLSELNKCHGTLSVYQSSISKNKVDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY SALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGSGTRSYSYRVLMQT GDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAAALL RIMEDRKGQENFQLIVITHDERFAQYIGQRQHAEKYYRVSVSGSDYSVDASCLT NT seq 3945 nt NT seq  +upstreamnt  +downstreamnt atgagcactgtagataaaatgcttataaaaggcatacggagctttgaccccgagaacaaa aacgtcatcacttttttcaggccattaacgctcatcgtcggccctaatggcgctggaaaa accactataattgagtgcttgaaggttgcctgcactggtgagatgccaccaaatgctcgc tccggtcatagcttcatccatgaccctaaggtggctggagagacagagacaaaggggcag ataaagctgcggttcaagacagcagcagggaaagatgtggtgtgcattaggtcttttcag ctaactcaaaaggcaacaaagatggagtacaaggccattgagagtgtactacagactatc aatcctcacactggagagaaagtttgcctaagctatagatgtgccgatatggaccgagaa atccctgctctcatgggtgtctcaaaggccattcttgaaaatgtgatttttgttcaccaa gatgaggcaaactggccattgcaagatccttctacactgaaaaagaagtttgatgatatt ttctccgctactaggtacacaaaggcgttggaagttattaaaaagcttcacaaggatcaa gctcaagaaataaagacatataagttgaaactggagaatcttcagacattgaaagatgct gcttacaagttgcgggaaagcatcgcccaagataaagagaaaacagagtcactgaaaagt cagatggaggagcttgaaaaagagattcagactctagagagtaagatccaccatgctgaa gcaactttaaaggaccttcatcaattgcagcgagagatagccaccaaaactgctgaaagg aaaacattgttcaaggaacaggaaaaacagtatgctgcacttacagaggagaatgaagac actgatgaagagctgagtgaatggaaaacaaagtttgatgaaaggatagcgcttctggaa tcgaaaattagcaaattggagagggaaatgaatgactcagagacaaagagttcccttctt aagcagtccataacagactatatcgtggagatcagcaagcttcaagctgaggctgaagct cttgcggtgttaaagaatgaaagagacgtcactatcaggaagctttttgacagacataac ttaggtgctgttccaagtgggccgctcagtgatgatgtcgcattgaatttaatgaatcgt ataaaactacgattagcacatcttgataaggatttacaagataaaaaggaatcaaatgag gcagaaattgcagctgcgtggaatcaatacgaaattgcaaataacctctggaatgaaaag gaggcgcaaaaactggctagagcagatattaagaatggcattttgaagcgtattgaagag aaggagaatgagcgtaatgagtttgaacgtgagatttctaatgttaatatggctcatctt gatgagagagagaagaaaatgcaaattgaatgcgagagaaagtctaagcagcttgcagaa agagaatttgactcaaacataaggcaaaagcagactgagatgttcaccatagaccaaaaa cttaaagatcttcatgctgaaaaagatcgtatggccaatgagtctgaggatagaattaag ctctctcttaagaaggcagagctggaaactctcaagaagaaacataaaaagctaatggat gataacaaggatacggtaaaaggagtattgaaaggaaggcttccatctgacaaggacttg aagaaagaaattactcaggcacaaagggcgctccagagagagtttgatgacttgagtgcc aaagcccgcgaagccgagaaggaggtcaatatgtcgcagatgaaaatagaagaagttaag cataacttgtccaaatatcacaaggacatggactcaagaaggagatttctggaatcaaag ctccagttgctggcccaggaatttgctggtgtagagtcctatcccaaaattatggactca gccaaagaaaaaagggatgtccaaaaaagcaagtacaacattgccgatggtatgcggcaa atgtttgatccatttgaaagagttgctcgtgctcatcacatttgcccttgctgtgagcgt ccgttctctgctgaagaggaggatgaatttgttaagaagcaacgagtgaaagctgctagc tctgctgaacatattaaagtattagctatggattcttcaaatgctgattctcgtttccaa cagttagacaagcttcgtttggtttatgaagagtatctcaaagttggaaaggaatcaatt cctctagcagagaagaacctgaatgagctaaatgaagaattagatcacaaaaatcaggct cttgatgatgttttaggtgtcttggctcagataaaggctgagaaggatgcagttgatgcg ctaatacaacctgtagaaacatctgacaggcttttccaagaaattcaaactctgcagaag caagtcgatgatttggattatggtcttgatatccgtgggcaaggcataagatctatggag gaaattcaatcggaattggatgaactgcagagcaaaagggaaaatttgtcttcggaagtg gagaaactgaaagatgatcggaggtacatggaaaatgagttttcaagtttccaattaaga tggtttactgtaagggaagagaagacgcaagcagcaaacaaattgaacaatgttaaaagg gcagaagaggaattggatgacttggtggagcagaaaaataaagttgagcttgaagagaag catcttgcagaggctgttggtcccttgtcgaaggaaaaggacaagcactttagggactac caaaatctgaaaacaaaacttagcaaggagttggaagagcaggcagaaattagaagacat tatcaacaagatgtagatgaacttaagaagattacctccaaaattagagagtattatgag ttaaagaaagaacaaaaattgaatgaactgcaggacaagcgaagcctgtcagaatctcag cttcaaaattgtgagtccagaaagcaagagatttcggctgaagtggcgaaaagtaatgct ttaatgcagaaccaggacagtttgagacgcaacattgaggataacttgaactataggaaa actaaggctgaagttgataagctcacccgtgagattgaattactggaagataaagtgctg aagatgggtggcctctccactattgaggctgagcttaaaaagctttcacatgaaagagag aagctactttctgagttaaacaagtgccatggtaccctatctgtttatcaaagcagcatt tccaagaacaaagttgatcttaagcaggcacagtacaaggatattgacaaacgctatttt gatcagttaatccagctgaagactacggagatggcaaacaaggatctggacagatattac agtgcccttgacaaagcactgatgcgcttccatacaatgaaaatggaagagatcaataag attatcagggaactgtggcagcagacttacaggggccaggacatagattacataagcatt cattcagattccgaaggttctggtactcgatcctacagctatagggttttgatgcaaact ggtgatactgagctagagatgcgagggaggtgtagcgctggccaaaaggtccttgcatca cttattataagattggcattggctgaaacgttttgtctcaactgcggaattctcgcactg gatgaaccaaccacaaacctagatggccccaacagtgagagtcttgcagcagctctctta agaattatggaggacaggaaaggtcaagaaaacttccaattaattgtcattacacatgac gagcgctttgctcaatatattggccagcgccagcatgcagaaaagtattatcgggtttca gtctccggcagtgattattcggtagacgcttcatgcttgacttag

DBGET integrated database retrieval system