Nicotiana tabacum (common tobacco): 107800880 Help Entry 107800880         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107800880   KO K18730   PERQ amino acid-rich with GYF domain-containing protein Organism nta  Nicotiana tabacum (common tobacco) Brite KEGG Orthology (KO) [BR:nta00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107800880 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      107800880    Surveillance factors     Other surveillance factors      107800880 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  GYF Motif Other DBs NCBI-GeneID:  107800880 NCBI-ProteinID:  XP_016479626 UniProt:  A0A1S4ASR0 LinkDB All DBs Position Un AA seq 1550 aa AA seqDB search MAEGKLDLPDDLLSSNPSDHSKGSDDSKPFMGQLDISKDQAMVDSSIPLSPQWLYAKPSD TKMEMHPPSSLSLGSSADSSQKEAWCTDMPEDKKDWRRTPVDTESGCRWREEERETSLLG RRERKKTDRDVNNRNSGLDTRRDSKWSSRWGPDGKEKENRSEKRIDVDKEDVHNDGQPFL ANRAVSERESDSRDKWRPRHRMEGNFAAPGSYRAAPGFGQERGKVEGSNVGFNLGRGRSA VTIVRPSSGGAIGASPFENSVAGKPSISAGIFCYPRGKTLDIYRMQKLGSSLCSMPENME EEPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGSGVSYNPFRKGQSMDDVTETVDT EPNNPKQGAPSADVTEEAADRLLKTSKGVEEANAYSFSYENGVKVKLDGGDNHEGQKERV SESITADERLLSRKRTVNNDCLKVISGSKSDTSEVSLPESGVTRAPVFENIQQHVAFDVS SKVPDDSNSLFAKSSSEIYWNNLLGRGTPPEELSLYYRDPQGEIQGPFLGADIISWFDQG FFGTDLPVRLEDAPEDSRFFELGDIMPHLKFGHEYVGNINLSQVEPSAVLEGKLDSGLHC SASVSEMVGSAALDGLSWPTSDFDGQNGLGGHRNQSVPDHPARQFKPPYLQNEELHDFVA QDEEIVFPGRPGSSGNPIGKTSIGPTDPSNMHRAIPNALTGGRVPNQEEPLHPLGLLWSE LEGTSGKSGPISDVPFSGGGQDQILNPVAARVAPFGAKTEPASTVETWTDAYRRNAVSEP NLYQDATDASHLLHRDHELNRFELADKLFSQQLQQQHPNSLMSSHNSHLNEAMLEQGANY NSIHQPQLASQTGQDLEHFMALQLQQQQQRQLQLQQQLQQQQQFHQQQMLLKEQQSHARQ LLLEQLLQSQICDSSRAQSRLGSIRHNSALEQVLIKQQILSELQQRSHLPPRHAEPSIEH LIQAKFGQIPRQGHQNDLMELLSRAKHGQLHPVEHQILQQEQVHERLRQRLEMEEDRQIG SVWHVDETGQFLRNPAVARRANSGFGPLDIYQLQQIPLPEEHVSHLERNLSVQDRLQRGL YDSGLLPLERTMSVPGGGPSVNLDAVNPLLRAQGLEMQDPNSRMQSAGHMPGFSTGTHAQ SPHHPLFSNQFHAPNADTIENHWPERNGQLPVDWMETRIQQLHLNGEMQRRDFDVKRASE DQSMWMSAGASDDSSKRLLMELLQQKSGQQSTEKAEMTRGILFERGFHSGQFSGTNASNC SFNPLLDQDTSLNQAFSVGSYGSNSGLPPQRDHVDEIASSLNVSEGLPFKSHSGALSEVE PAFSSINDASLVYLEARESIGGQAGVMTVEGEMPVVNLLSRHSSLGTGGGNLDFYNDKSD RGDSIAEEIPMERVTVTSKRLDNILLKRPPVLRVSSTQEGLSDLTSDTLVRSKNPSDAMA SERGKREAGGNAANQVRDTVTSGKKDVRFRRTASCGDADVSETSFSDMLKSNAKKPAAQE AHASEALDGTQCARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED NT seq 4653 nt NT seq  +upstreamnt  +downstreamnt atggccgaagggaagctcgatctccctgacgatctcctttcctctaacccttccgatcac tccaaaggtagcgatgacagcaagcctttcatgggccagcttgatatttccaaagatcaa gccatggtggacagcagcattcctttgtctccacaatggctttatgctaaaccaagtgac acaaagatggaaatgcatccaccgagctctttgtcacttggaagttctgctgattcaagt caaaaggaggcctggtgtacagatatgcctgaggacaaaaaggattggagaagaacgcca gtggatactgagagtggttgccggtggcgtgaggaagagagggaaactagcttgcttggt cgaagagaacgaaagaaaaccgatcgtgatgttaataaccgcaattctgggcttgataca agacgtgatagcaagtggtcttctaggtggggtcctgatggcaaagaaaaagaaaatcgc agtgagaaaaggatagatgtagataaggaagatgttcataatgatggtcaaccatttctc gctaaccgtgctgtctcggagcgggagtcagattctcgtgataagtggcgtccacgccat agaatggaaggtaactttgcggctccaggttcctatcgtgctgccccaggctttggacag gaacgaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgtgggaggtctgct gtgactattgtaagaccttcctctgggggtgcaattggtgcttcaccatttgagaattct gttgctggaaaaccaagcatctcagctggcatattttgttatccaagggggaaaactctt gacatataccgcatgcaaaagcttggctcatctctttgtagcatgcctgaaaatatggaa gaagaacccccagttactcaagtaattgctattgaaccattggcttttgttgttcctgat gctgaggaggaggctgtcctcaatgacatatggaaaggtaaaattactggtagtggtgtt tcttacaatccttttagaaagggtcaatcaatggatgatgtcacagaaactgtggatacg gagcccaacaatccaaagcagggtgctccctctgctgatgtcaccgaagaggcagctgat aggttactgaaaacttcaaaaggtgttgaagaagccaatgcctatagcttttcttatgag aatggtgtcaaggtcaagttggatggtggagataatcatgaaggacagaaagagagagtt tctgaatctattactgcagatgaaagattgttgtccaggaagagaactgtcaataatgac tgcttgaaagtcattagtgggtccaaatctgatacttctgaggtcagcttaccagagtct ggagtaaccagggcccctgtctttgagaacatccaacaacatgttgcctttgatgtcagt tcaaaggttcctgatgattcaaattccctatttgcaaagtcctcttcagaaatctactgg aacaaccttctgggaaggggtaccccacctgaggagttgagtttgtattatcgtgatcca cagggcgaaatccaggggccatttcttggagctgacatcatctcatggtttgaccagggt ttttttggaactgacttgccagttcggttggaagatgcccctgaagattcacgtttcttt gaactgggtgacataatgccccatttgaaatttggacatgagtatgttggtaacatcaat ctttctcaggtagaaccatctgctgtactagaggggaagttggactctggtttacattgc tcagcttctgtttctgagatggttggttctgctgccctggatggcttgagctggccgaca tctgattttgatggccaaaatggccttggtggacatcgtaatcagtcagtacctgatcat ccagctcgtcaatttaaaccgccttatttacaaaatgaagagcttcatgattttgttgct caagacgaagaaattgtgtttccgggaagacctggaagcagtggcaatcctattggaaaa acttcaataggacctactgatccttcaaatatgcaccgtgcaattccaaacgcactgact gggggtcgagttccaaatcaggaagagccactgcacccacttggtttattatggtcagag cttgaaggcacttcaggaaagagtggtcctatctcagatgttccatttagtggaggtggt caggatcagattctaaaccctgttgctgcaagggttgcaccatttggtgctaagacggaa ccagcctctactgtcgagacatggactgatgcttatagaagaaatgctgtatcagaaccc aacttatatcaagatgctacagatgccagccacttgttgcacagggaccacgaactgaac cggtttgagttggcagataagctgttctcccaacaacttcaacaacagcatcctaatagt ttgatgtcttctcataatagtcatttaaatgaagcaatgctggaacaaggggcaaactat aattcaatacatcaaccgcagttggcgagtcagactgggcaggacttggaacactttatg gctcttcagctgcagcagcagcagcagagacagttacagcttcaacaacaactgcaacaa cagcaacagttccatcaacagcaaatgctactgaaagagcaacagtcccatgctagacag ctgcttcttgaacaattattgcagagtcaaatatgtgattcaagtcgtgcacaatcacgt cttggttctattaggcataacagtgctctggagcaggtgttgattaaacagcaaattctg agtgaactgcagcagcgttcacatcttcccccaagacatgctgaaccatctattgagcat ctcattcaagcaaaatttggtcaaataccgcgtcaagggcatcaaaatgatttgatggag ctcctatctcgggcaaagcatggacagctgcaccctgtggaacatcaaatccttcaacag gaacaagtgcatgagaggctaaggcaacgtttggaaatggaggaagacagacagattggt tctgtctggcatgtagatgaaactggtcagtttctccgaaatccagctgttgctcgtcga gccaactctggatttggcccattagatatttaccaactgcaacagataccccttcctgaa gagcatgtcagtcatctggaaaggaatttgtcagtgcaggatagacttcagcggggtctc tatgactctggattactgcctttagaacgtacaatgtcagtacctggtggtggtcctagt gttaatttggacgctgtaaatcctctattgcgtgcacaaggtttagaaatgcaagatcca aattcaagaatgcaatcagctggtcatatgcctgggttttcgactggaacccacgcgcaa tctcctcaccatcctttgttttccaatcaatttcacgctccgaatgcagatacaattgaa aatcattggcctgaaagaaatggtcagttaccagttgattggatggaaactcggattcag caactgcatcttaatggtgagatgcaaagaagggattttgatgtcaaaagggcttctgaa gatcaaagtatgtggatgtcagctggtgctagtgatgacagttcaaagcgattacttatg gagctgctccagcaaaaatctggccagcagtcaactgagaaagcagaaatgaccaggggg attttgtttgagaggggctttcactctggtcagttttcggggacaaatgcttcaaactgt tcgttcaaccctcttttggaccaggatacgagtctaaaccaagcctttagtgttgggtca tatggttctaattcaggtttgccaccacagagagatcacgtagatgagattgccagtagt cttaatgttagtgagggattgcccttcaaatctcattctggagctttatctgaagttgaa cctgccttttccagcatcaatgatgcctctctggtgtatcttgaggctcgagaaagtatc ggtgggcaagctggtgtgatgactgtagagggggaaatgccagttgttaacttgcttagc aggcacagttcacttgggactggaggtggaaatcttgacttctacaatgacaagagtgat agaggggattcgattgcggaggaaattccgatggaacgggtgacagtgacatcaaaaagg ctggataatatcttgctgaagcgtccgcctgtcttacgagtttcttcgacacaggagggt ctatctgatctaacttctgatacccttgtgagaagcaaaaatccttcagatgccatggct tctgaaaggggcaagagggaagcgggaggtaacgcagcaaatcaagtccgtgacaccgtg acatctggaaagaaagatgtgcggttccgacggactgcatcttgtggtgatgctgatgtt tcagagacatcattcagtgacatgcttaagagtaacgcaaagaagccagcagctcaggag gcacatgcatcagaggcattggatggaacacaatgtgcccgtagtggtaagaagaaagga aagaaaggaaggcagattgatcctgctcttcttggattcaaggttacaagcaatcgcatc atgatgggtgagatacaacggatagaagattag

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