Nicotiana tabacum (common tobacco): 107801488
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Entry
107801488 CDS
T04643
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nta04812
]
107801488
Cytoskeleton proteins [BR:
nta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107801488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
eIF2A
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_DCAF12
PROPPIN
VPS8_N
Motif
Other DBs
NCBI-GeneID:
107801488
NCBI-ProteinID:
XP_016480304
UniProt:
A0A1S4AUE3
LinkDB
All DBs
Position
Un
AA seq
673 aa
AA seq
DB search
MTTTKRAYKLQEFVAHSLSVNSLKIGRKSSRVLVTGGEDHKVNLWSIGKPDAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKILRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCTHTYKGHSRGVNTIRFTPDGRWVVSGGEDSTVKIWDLTAGKLLH
DFKCHEGQIRSIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETTGVRCMAFNTDG
RTLLCGLHENLKVFSWEPIRYHDTVDVGWSTLSDLSIHEGKLLGCSYNQSCVGVWVVDIS
CLEPYTVDSTTRLNGHSVVKSNLRANLSTPAEDATDASFGRLLSSQNSDPVKESKYFGRL
SLSHNKDLQKDSTTLTTITDTPDTSQKINLSTGPRAPPISSRTVPNTTGVKRNSSKGQST
ENASIVNKSEIIPVLVPRNNERMELASERRKGGVAGREMPQRLQPKVSDWKSPTPNENLG
RPTAAAQSEVEVPKAIESSSPADRNIFPFVKCSIFGNAATDRNVNDDKNLVSTKHEMDTA
SESLSRHQIEDYEARGNILNRNPYSMQGQLRGRTQSTVANLEKRDRVPNYEGLASCIARA
VPDPDVVPTNMNLTHRNSIIIHEKREDPLSAVSEVVVAADEDTIAVLMEQHNQFVGSLQS
RLAKLQVAIWKTH
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccactaaacgtgcttataagctacaggaatttgtagcacattctttaagcgtg
aatagcttaaagatagggaggaaatcatccagggttcttgtaaccgggggagaagatcac
aaggttaacctctggtccattggcaagcctgatgccatattgagtttgtcaggtcattca
agcggaattgattcagttagctttgattcttcagaagttctggtagctgcaggagcagca
agtggtactatcaagctttgggatttagaggaggccaagattcttcggactctcactgga
catagatccaattgtatatcattggacttccatccctttggtgagttctttgcatctggg
tctctggacacaaatctaaagatatgggatattagacgcaaagggtgcactcacacatac
aaagggcacagtagaggtgtcaacaccatcaggttcacgccagatggccgctgggttgta
tctggtggagaagacagtaccgtaaagatatgggatttaactgcaggaaagcttttacat
gatttcaaatgtcatgaaggacaaattcggtcaatagactttcatcctcatgaattttta
ctggcaacaggttctgctgacaaaacagttaaattctgggaccttgaaacttttgaactc
ataggttctgctggacctgagacaacaggagtgcgttgcatggcctttaataccgatgga
agaacccttctttgtggtttacatgagaatttgaaggttttctcgtgggaaccaattagg
tatcatgatacagtagatgttggctggtctacattgtctgatcttagtattcatgaagga
aaacttcttggatgttcttacaatcaaagttgtgttggagtgtgggttgtcgatatttca
tgtcttgaaccatatacagtggatagtactacacgattaaatggtcactcagtagtgaaa
tccaatttgagagcgaatttatccactccggctgaggatgccacagatgcaagtttcggg
agactattaagttcacaaaactctgatcctgtgaaagaatccaagtattttggaagactt
tctttgtcacacaacaaggatcttcagaaggattctactactcttactactatcacggat
actcctgacacttcacaaaaaatcaatctcagtactggtccaagagcacctccaatcagc
tcaagaacagttcctaatacgactggtgtaaagaggaattcgtcaaaaggccagtcaaca
gaaaatgcttctattgtcaataaatcagagataatacctgttcttgtcccaagaaataat
gaaagaatggagctggcatccgaacgcaggaaaggaggagttgcaggaagggaaatgcca
caaagattgcagccaaaagtatctgattggaagtctcctacccccaacgaaaaccttggg
aggccgactgctgcagcacagtctgaagttgaagtacctaaggctattgaaagtagcagt
cctgcagataggaacattttcccttttgttaaatgctcaatatttggaaatgctgctact
gacagaaacgtgaatgatgacaagaatttagtttccacaaaacatgaaatggatacagca
tcggaatcgctttccagacaccaaattgaagattatgaagcccgtggaaatattctaaat
aggaatccttattccatgcaaggtcaactaagaggaaggacacagtctactgttgcaaat
ttggaaaagagagacagagttcctaattatgagggtcttgcttcctgcattgcccgggcg
gtacctgatccggatgtggttccaaccaatatgaatttaactcatcgtaattcaataatc
atacatgaaaagagagaagaccccctttcagctgtaagtgaggtggttgttgctgccgat
gaggataccattgcggtgttgatggaacagcacaaccaatttgttggctcgctgcaatct
cgtttggctaaattacaggtagcaatttggaaaactcactag
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