Nicotiana tabacum (common tobacco): 107801525
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Entry
107801525 CDS
T04643
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107801525
09124 Replication and repair
03420 Nucleotide excision repair
107801525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107801525
03400 DNA repair and recombination proteins [BR:
nta03400
]
107801525
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107801525
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107801525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107801525
NCBI-ProteinID:
XP_016480352
UniProt:
A0A1S4AUE0
LinkDB
All DBs
Position
Un
AA seq
452 aa
AA seq
DB search
MPQVKIVARNFMDMVASLLAVKLDMLYDNSFICEVILRSLPPLAKKYVLQLLYIDIPISA
KSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYRLNPKFQFNLQKHIVHGGVL
PREPMPSNITVRLPSLEELEAFAVEQWECFLLHLISSSEAGKTTNISSSMMKIFQRGLLS
QRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTG
KAYNTNTLTDLQRSITKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTSRKQGFI
VIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAITKESLYKAFQNGITAEQIISF
LQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMIPAHLYDEFPSKDVFEAACDFARE
YGGLLWEDSKQLRIIVKADILTEMKEFLRRQK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagtgaagatagtagccaggaatttcatggacatggtggcttcactgcttgca
gtgaagctcgacatgctctacgacaattcctttatctgtgaagtcatcctcagatcgtta
cctcccttagcaaagaagtatgtgctacaattgttgtatatagacataccgatctcggcc
aagtcaatggaggagtgggtgcttccagatggattctcaaagcataaagttgccattgat
agattgatacagctgagagtaatgacggaaacatttgacaggaagaaggaagccatgtat
cgattaaatccaaaatttcaatttaatcttcagaagcatatagtccatggtggagtctta
ccaagggaaccaatgccttctaatatcactgtgaggcttcctagcttggaggagttagag
gcatttgctgttgaacaatgggagtgctttctgctgcaccttataagctccagtgaagct
ggaaagaccacaaacataagctcttcaatgatgaaaattttccagcgtggccttttaagt
cagagagatgacagggaacctccaaggttgactgaaagtgggttccagttcctgctgatg
gacacaaatgcacagctttggtacatcatcagggagtacataacaaatgctgaggagcga
ggtgtggattcagcagatcttattgcatttctgttggagctaagctttcatgttactggc
aaggcatacaatacaaacacattaactgatctccagcgaagtataactaaggacctttca
gatttgggactggtcaagctgcagcagggaaggaaagagagttggtttattcccaccaaa
cttgccaccaatctgtcaattagcttagcagatacaacgtccaggaaacagggatttatc
gttattgaaacaaacttcaggttgtatgcatattcaacatcaaaattacactgtgagatc
ctacgcctctttgcaagggtggagtaccagcttccaaatctcattgtcggtgctattaca
aaagaaagtttgtataaagcttttcaaaatggcattactgctgagcagataatttctttc
cttcagcagaatgctcatcctagggttgcagagaggataccatctgtgccagagaatgtt
actgatcagattagattgtgggaatcagatctgaatcgggttgagatgattcccgcccac
ctctacgatgaattcccttctaaagatgtctttgaggctgcatgtgattttgccagggaa
tatggaggattactgtgggaggactctaagcaactgcgcatcatagtgaaggctgatatt
ttgacagagatgaaggaattccttcgtcgtcaaaagtaa
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