Nicotiana tabacum (common tobacco): 107801611
Help
Entry
107801611 CDS
T04643
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107801611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107801611
Spliceosome [BR:
nta03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107801611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
PRP4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
WD_LRWD1
eIF2A
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
107801611
NCBI-ProteinID:
XP_016480447
UniProt:
A0A1S4AUP3
LinkDB
All DBs
Position
Un
AA seq
614 aa
AA seq
DB search
MDAEDEIPASTEEPSTLVGDNSTMVNAIGAINLQPVPPVTPPVAPTVILPPVVPAIAPRP
AVPTPIPPPLAPLPGRPPILRPPVAQNGEVRASDSDSDEEMGSDRGTGGSAQEYEISEES
RLVRERQEKAVQELLMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRML
MARLDAEGQLEKLMKAHEDEEAAASAAPAEEEDIQYPFYTEGSKTLLDARVEIAKYSLVK
SALRLHRARRKRDDPDEDVDAEVDWALKQAGSLALDCSEIGDDRPLWGCSLSHDGKMLAT
CSLSGIAKLWSMPQVQKLSTLKGHTERATDVVFSPTSNYLATASADRTAKLWNSEGSLLR
TXTERATDVVFSPTSNYLATASADKTAKLWNSEGSLLRTFEGHLDRVARIAFHPCGKYLG
TASFDKTWRLWDVESGEELLLQEGHSRSVYGLSFHHDGSLVASCGLDALVRVWDLRTGRS
ILALEGHVKPVLGVSFSPNGYHLASGGEDNTCRIWDLRQRKSLYIIPAHSNLISQVKFEP
QEGYFLVTASYDTTAKVWSSRDFKPVKTLSGHEAKVTSLDVAGDGQHIVTVSHDRTIKLW
SGKNIEKEEKMDTD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgaggatgaaattcctgcttcaacggaagaaccttcgactctagttggtgat
aattcgactatggttaatgctataggagcgataaatcttcaaccagttccacctgtcact
ccaccggttgctccaacagttatccttcctccagttgtgcctgcaattgctccacggcct
gcagtccctacccctattcctcccccattagctccgttgcctggtcgtccacctatcctt
aggcctccagtagctcagaatggagaagtgcgagcgagcgattcagattctgatgaagaa
atgggatctgatcgtggtactgggggctcagctcaagaatatgagatatccgaggagagc
agacttgtcagagagaggcaggagaaagccgtgcaggagcttctgatgaagcgacgtgca
gctgcgctagctgttcctacaaatgatatggctgttcgggctcgccttcgaaggcttggt
gagcctataactctctttggagaaagggagatggaaagaagggaccgtctgcggatgctt
atggcaaggcttgatgcagaagggcagctggaaaagctgatgaaagcgcacgaggatgaa
gaagctgcagcttctgctgcaccagcagaggaggaggatattcagtaccccttctacact
gaaggatcaaaaacacttttagatgcaagggtagaaattgcaaaatattctttagttaag
tcagccttacgtctccaccgcgcaaggaggaaaagggacgatccagatgaagatgtggat
gcagaggttgattgggctttgaagcaagcagggagcctcgcccttgattgcagtgaaatt
ggagacgatcgacccctttggggatgctcgctttcacatgatggaaagatgcttgctacc
tgttctctgagtggaattgcaaagttatggagtatgcctcaagtgcaaaagctttccacc
ctaaagggtcacaccgaacgagctactgatgttgtgttctctccgacaagcaattattta
gctactgcatctgctgataggactgcaaagttatggaactcagaagggtctcttctcagg
acgnacactgaacgagctactgatgttgtgttctctccaacaagcaattatttagctact
gcatctgctgataagactgcaaagttatggaactcggaagggtctcttctcaggacattt
gagggacatttggaccgtgtagctcggattgccttccatccttgtgggaagtacttgggc
acagctagctttgacaaaacttggagattatgggatgtagaaagtggtgaagagttgctt
ttgcaagaaggtcacagtaggagtgtgtatggattgtcgtttcaccatgatggttcattg
gtggcatcatgtgggctggatgcacttgttcgagtgtgggatttaaggactggacgaagt
attcttgctctggaaggtcatgttaaaccggttctcggtgtcagcttttctcccaatggt
tatcatttggcaagtggtggtgaagataatacctgccgtatttgggacttaaggcagaga
aaatctttgtacatcatacctgctcactccaatcttatttctcaagttaaatttgaacct
caggagggatactttttggttacagcgtcctacgatacgacggctaaggtatggtcatca
agggatttcaaaccggtgaagacactatctggtcatgaagcaaaagtcacgtcattggat
gtagcgggagatgggcaacatattgtcactgtatctcatgatcgaacaatcaagctatgg
tcaggcaaaaacattgagaaggaagagaaaatggataccgactag
DBGET
integrated database retrieval system
