Nicotiana tabacum (common tobacco): 107801612
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Entry
107801612 CDS
T04643
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107801612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107801612
Enzymes [BR:
nta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107801612
DNA repair and recombination proteins [BR:
nta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107801612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Motif
Other DBs
NCBI-GeneID:
107801612
NCBI-ProteinID:
XP_016480449
UniProt:
A0A1S4AUU8
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Position
23:complement(1944421..1952886)
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AA seq
571 aa
AA seq
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MLRSLAKQVLASQPSFAPPFAASFGGPPPPPPTLQSMLQSLKLGLYNFIHPNSVGVILRK
PKFQVLASVNFTIMGSKNRPFSRLSAVAKSNEPMSVAVEKGVSKENGDKEILVEDMETVE
KMTVPQLRVKLRSLGIPSRGTKQELVASLTTFLNSKLNDAGNGSVAREDQVSSEKSLGVV
DNTSKRKARKVSSNQSDVAASEVSSTRQTKKRVKKDNTKDTSVDIIVKQAEITQELSAES
NDIKGKKTVRAKRKVSAATASAHIEVSEGVDISVNQDEPWTIFAHKKPKDGWIVYNPKTM
RPPPLSKDTKHVKLLSWNVNGLRALLKLKNLLIQQLADREDFDVLCLQETKLQDKDVEAI
KESLSGYENSFWTCSVAKLGYSGTAIISRIKPLSVRYGLGIPDHDTEGRLVTVEFDNFYL
LCGYVPNSGDGLRRLTYRITEWDPSLSNYMKELEKSKPVVLTGDLNCAHEEIDIYNPAGN
KRSAGFTDEERQSFETNFLNKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLV
SEHIADNVHDSYILPDVDGSDHSPIGLILKL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaagcttggccaaacaggtattagcttcccaacccagcttcgcgcctccattt
gctgcctcctttggcggtccacccccccccccccccacactacaatcaatgttacaatct
ctcaaattaggcctatacaatttcattcatccgaatagtgttggagtgattttaaggaaa
cccaagtttcaagttttggcttctgtgaattttacgataatggggtctaaaaatagaccc
ttttcaagattatcagctgttgcaaagtcaaatgaaccaatgagcgttgcagttgaaaag
ggtgtttcaaaggaaaatggtgacaaggagattcttgtggaggatatggaaacggtagag
aaaatgacagttccacagctcagagtgaaacttaggagtcttgggattccttccagaggt
actaaacaagagcttgttgcttctctgacgacattcctcaacagcaaacttaatgatgca
ggcaatggatctgtggcacgggaggatcaagtatcatctgagaagagtctaggagtagtc
gataacacttcaaaaaggaaggctagaaaagtgtcaagtaaccaaagcgatgttgctgca
tcagaggtttctagtaccaggcagacgaaaaaacgggtgaaaaaagacaacaccaaggat
accagtgttgacattattgttaaacaagctgaaattacccaggagctctccgctgaatct
aatgacatcaaaggcaagaagactgtacgagcaaagagaaaagtttcagcagcgactgct
tcggcacacattgaagtttctgagggcgtggatatttctgtaaatcaagatgaaccttgg
actattttcgctcacaagaagccaaaagatgggtggattgtatacaatcctaaaacaatg
aggccgcctcctctttctaaggatacaaaacatgttaagttattgtcatggaatgtcaat
ggtttgagggctctattgaagttaaagaatcttttgatacagcagcttgccgatagagaa
gattttgatgttctatgcttacaggaaactaaattacaggataaagatgttgaagcgatc
aaagaaagtctcagtggctatgagaatagcttttggacatgcagtgtcgctaagcttggg
tattctggtactgcaatcatctctcggatcaagccactttctgtcagatatggtctcggt
atacctgatcatgatactgaaggacgacttgtcacggtggaatttgataacttctattta
ctgtgtggatatgttccaaattctggcgatggactacggcgattgacgtacagaattaca
gagtgggatccttctctcagcaattacatgaaagagctagaaaagtcaaaacctgttgtt
ttgaccggtgatctaaattgcgcccacgaggagatagatatttataatcctgctggaaat
aaaagaagtgcaggctttactgatgaagaaagacagtcctttgaaacaaactttttaaac
aaggggtttgtagatacattcaggaagcagcatcctggtgtcgttggttatacttactgg
ggttaccgccatggtggacgtaaaactaataaaggatggcggctcgactacttccttgtc
tcagaacacattgctgacaacgtgcacgactcctacattctgccagatgtagatggcagt
gatcacagtcccattggccttatcctgaagctgtag
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