Nicotiana tabacum (common tobacco): 107802425
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Entry
107802425 CDS
T04643
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107802425
Enzymes [BR:
nta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
107802425
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Other ribosome biogenesis factors
107802425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
Methyltransf_31
Ubie_methyltran
ASPP2-like_RA
RASSF8-10_RA
PCMT
Motif
Other DBs
NCBI-GeneID:
107802425
NCBI-ProteinID:
XP_016481419
UniProt:
A0A1S4AXY7
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All DBs
Position
Un
AA seq
484 aa
AA seq
DB search
MACKKPQGNTKPAANKPNQKRMSNAERSAYFARREAAKVLRTILQGDSRRRAVGSIKSLV
YSPSVRNKKATYALVCQTLKYLPIIKDVFDIANVLSSKWKRQEELMYIILYDILFGQEAL
LAGDAEKILLQRKDVLQAALAKLLVRKKVKHVSDLMTSYKISDLPKPRYARVNTLKMDVE
CALLEFKKQYEVCQDAMVPDLLIFPPRTDLHDHPLVKNGSVFLQGKASSMVAVALGPKPG
WEVIDACAAPGNKTVHLAALMKGKGKIIACELNIERVKRLKDTVKLAGPTNVKVKHEDFL
NLSPEDPAYSKVQAILLDPSCSGSGTVVDRLDHLLPSYTADSSDVHRQEKLAAFQKKALE
HALSFPAVERVVYSTCSINQVENEDVINSVLPLASSYGFELTTVFPQWPRRGHPVFDGSQ
HLLRTDLIEDKEGFFIALFVRKGASTPAKHSRDVAYTLRAIQRRKKRRINSFFHFKTFGL
FLQS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaagaagccgcaagggaacactaaaccggcggcgaataagccgaaccagaag
cggatgagcaacgccgagcggtcggcgtactttgcacgtagagaagccgccaaggttttg
cgtactattctacaaggagactctcggcgtcgagccgtcgggtccatcaagtcgctggtg
tatagtccttccgttaggaacaaaaaagctacctatgctttggtttgtcaaaccctcaaa
tatcttcccattatcaaggatgtctttgacattgccaatgtgctgagtagcaagtggaag
aggcaagaagaattaatgtatataatcttgtatgacattctttttggccaggaggcttta
ttagctggtgatgcagaaaaaattcttctccagcggaaggatgtgttgcaggcagctctt
gccaagcttttagtgcgaaagaaagtaaaacatgtctcagatttgatgacttcttataaa
atctcagaccttccgaaacctcgttatgctcgtgtaaatactctgaagatggacgtagag
tgtgccctgctcgaatttaagaaacagtatgaggtctgtcaggatgccatggttcctgac
ctgttgatttttccaccaaggactgacctgcatgatcatcctttggtgaaaaatggaagt
gtgtttttgcagggtaaggcgagttccatggttgcagttgctcttgggcctaaacccgga
tgggaggtcattgatgcatgtgcagcaccagggaacaaaactgttcatcttgctgctcta
atgaagggaaaaggaaagattattgcttgtgaacttaatatagaaagggttaaacgtctg
aaagacactgttaaactggctggaccaactaacgtgaaagtcaagcatgaggacttctta
aacttgagtcctgaggatccagcatactcaaaggttcaagcaatacttttagatccatca
tgttctggatctgggacagttgttgatagattagatcatctgctcccctcatatactgca
gattcctctgatgtacatagacaagaaaagctcgctgctttccagaaaaaggctttggaa
catgcattatcttttccagctgttgagagagttgtttacagcacatgttctattaaccaa
gttgagaatgaagatgtaatcaactctgttctgcctcttgcttcttcttatggttttgaa
ctgacgacagtctttccccaatggcctcgccgaggtcatccagtttttgatggatctcaa
catttgctgagaacggatctcatagaggacaaggagggcttttttattgctttatttgtt
agaaagggagcgagcactccagccaagcacagcagagatgttgcatacactttacgagct
attcaacgaaggaagaaaagaagaataaattctttcttccacttcaaaactttcggtttg
ttcttgcagtcctag
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