Nicotiana tabacum (common tobacco): 107802468
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Entry
107802468 CDS
T04643
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107802468
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107802468
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107802468
NCBI-ProteinID:
XP_016481463
UniProt:
A0A1S4AY91
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MKMLISYFLALLLLPSLVFSVPDSPVFNVLDYGAVGDGLTDTTNAFNKTWEATCTSLSSS
PTMYIPFGNTFLIHPLILSGPCVSPGVTIEINGNIVAPIEPSEWTCLTTHCDKWIYIKHV
NGLTVRGNGTINGRGQKWWDVNDRRKPTAFDISHCQNISVSGLSFKDNPHVHFHIENSES
ATVSNITIDAPAKSPNTDGIHLSSSRDVSINHCRIGTGEDCISIVDGCSNLKISNIICGP
GHGISIGSLGKHGSNDTVENVLVSDVVFIKSTNGARIKTWQGGQGYARNIIFERILSQDS
HNPIIIDQFYCDHENCTEHDLAVQVSGITFRQILGTSQGEFAVKLDCSAKVPCTGILMED
IYIRSGTKGEARSYINSAHGFVKGQNTPEIRL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctcatctcatactttcttgctctactacttttgccttcattggttttttca
gtacctgattctccagtgtttaatgttctggattatggtgcagttggagatggcttgacc
gatacaaccaatgctttcaacaaaacatgggaagcaacatgcacatcattgtcatcttct
ccgacgatgtacattccttttggcaatacgttcttgattcatcccttgatattgagtggc
ccttgcgtatcaccgggcgtcactattgagataaatggaaatatagttgcaccaattgaa
ccctcggaatggacgtgtttgaccactcattgtgataagtggatttatattaaacatgtt
aacggccttacagtacgtgggaatggaacaattaatggtcggggacaaaaatggtgggat
gttaatgaccgcaggaaaccaactgcttttgatatttcacattgccaaaacattagtgta
agcggactaagctttaaggacaaccctcacgtgcattttcatattgagaactccgaatct
gccacagtctcaaacataactatagacgccccagcgaaaagtccaaatactgatggtatt
catctttctagcagccgagacgtttccattaaccattgtcgaattggaactggggaagat
tgtatctcaattgtagatggttgttccaatctgaaaatcagcaacataatatgcggacca
gggcatggtataagtattggaagtctaggcaagcatggatcaaacgacacagttgaaaat
gttcttgtcagtgacgtggtgttcataaaatctacaaatggtgctcgaataaaaacgtgg
cagggaggccaagggtacgcaaggaacatcattttcgagagaatattgtcgcaagattct
cataaccctataattattgatcagttctattgtgatcatgaaaactgtacagaacatgat
ttagcagtacaggttagtggtattacttttagacagatacttggaacttcccaaggtgaa
tttgcagtgaagctggattgcagtgctaaagttccatgtacgggtatattaatggaggat
atatacatccgttcaggcaccaaaggtgaagctagatcgtatattaatagtgcacatgga
tttgttaagggtcaaaatacacctgaaatccgcctttga
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