Nicotiana tabacum (common tobacco): 107802514
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Entry
107802514 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107802514
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107802514
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107802514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
107802514
NCBI-ProteinID:
XP_016481518
UniProt:
A0A1S4AYE4
LinkDB
All DBs
Position
Un
AA seq
592 aa
AA seq
DB search
MASNPNNALTNTRFSDLEPRLSEPVLEALTNSGFEFCTPVQAATIPLLCNYKDVTVDAAT
GSGKTLAFVVPLVEILRRSSSNPKPHQVMGIIISPARELSSQIFHVAQPFISTLANVRPM
LLVGGQDVNADLRKIEEEGANLLIGTPGRLYDIMERMDILDLRDFEILILDEADRLLEMG
FEKQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLNGSASSGN
SSKTPSGLHIEYLECEADKKSSQLVHLLTKNKSKKIMIYFMTCACVDYWGTVLPRLFCLK
SFSLISLHGKMKQSAREKAIASFTSISSGILLCTDVAARGLDIPGVDYIIQYDPPQDHKM
FIHRVGRTARLGRQGSAVVFLLPKEEAYVEFLRLQGVFLEEGECASEAPDIIDEIRSAAK
KDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGTGYGLLQLPSVPEVKHHSLS
TKGFTTVEDINLEEIKFKDKSREKQRKKNLQARKAARAQQEEQKTQRLKKEANSTVTAMR
KKTAKQRRATQLVEDDDEITREYRLMKKLKKGAINENEFAKLTGTEDLLSDI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatccgaacaacgccttaacgaatacgcgtttctccgacctcgaaccacgc
ctctcggagccagttttggaagccttaaccaattcaggcttcgagttttgtactcctgtt
caggccgccaccatacccttactctgcaactacaaggatgtcaccgtcgacgccgccact
ggctctggtaaaaccctagccttcgtcgttcctctcgttgagatcctccgtcgctcctcc
tctaaccccaaacctcaccaggtaatgggtataattatatcacctgccagggagttgtcg
tcacaaatatttcacgttgctcaaccgttcatttccacattagcaaatgttaggcctatg
ctcctcgttggaggacaagatgtaaatgcagatctcaggaagatagaggaagaaggagca
aatttgttgatcgggacacctgggaggctatatgacataatggagcgcatggatatactg
gacttacgggattttgagattctgatattagatgaggctgataggctattagagatggga
tttgaaaaacagataaattcaattatttctcgattacctaaacttcgaagaacgggtctc
ttctctgctacacaaactgaggcagttgaagaactatcaaaggcaggattaagaaatcct
gtcagggttgaagttcgggcagaagcaaaacagttgaatggttctgcatcatctgggaat
tcgtcaaaaacaccttccggccttcatattgagtatcttgaatgcgaagcggacaagaaa
tcttcgcagcttgtacacctcctaacgaagaacaagtcaaaaaaaattatgatctatttc
atgacttgtgcttgtgttgattactggggaactgttcttccgcgtctcttttgtctgaaa
agtttttcattaatatctcttcatggaaagatgaagcagagtgcaagggagaaagcaata
gcatcatttacatctatttctagcggcattcttttatgcacagatgtagcagcacgtgga
cttgatataccaggtgttgattatataatacagtacgaccctcctcaggatcataaaatg
tttatacatagagtaggccgaacagcaaggctgggccgacaaggaagtgctgttgttttt
ctattaccaaaggaggaagcatatgtggaattcttgcgtctacaaggcgttttcttagaa
gagggggaatgtgcctctgaggctcccgatattatcgatgaaatacggtcagcagcaaag
aaagatcgtgatgtaatggagaaaggacttagggcctttgtgtcatacatccgtgcgtat
aaagagcatcactgctcttacattttgaggtggaaggagcttgagattgggaagctgggc
acaggatatggtcttttgcagcttccttctgtgcctgaggtgaagcatcattctctttct
acgaagggatttaccacagttgaagatatcaacctggaggaaatcaagtttaaggacaag
tcccgggagaagcaaagaaagaagaatttgcaagcgagaaaagctgcaagggcacaacaa
gaagaacagaagacacagagacttaaaaaagaggcaaattctacagtaactgccatgaga
aagaaaactgccaaacagagacgtgctacgcagttagttgaagatgatgatgagattaca
agggagtaccgcttaatgaaaaagctgaaaaagggagcgatcaatgagaatgagtttgca
aaattgactgggactgaggacttgctttctgacatatga
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