Nicotiana tabacum (common tobacco): 107802633
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Entry
107802633 CDS
T04643
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107802633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107802633
03009 Ribosome biogenesis [BR:
nta03009
]
107802633
04131 Membrane trafficking [BR:
nta04131
]
107802633
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107802633
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107802633
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107802633
Membrane trafficking [BR:
nta04131
]
SNARE
SNARE associated proteins
Others
107802633
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107802633
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107802633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
AAA_28
AAA_18
Mg_chelatase
nSTAND3
ATPase_2
IstB_IS21
AAA_lid_PRS2_C
Viral_helicase1
Parvo_NS1
AAA_7
ABC_tran
DUF815
Vps4_C
TsaE
NB-ARC
NACHT
RCF1-5-like_lid
Zot
Molydop_binding
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
107802633
NCBI-ProteinID:
XP_016481648
UniProt:
A0A1S4AYQ8
LinkDB
All DBs
Position
Un
AA seq
810 aa
AA seq
DB search
MADPTCSTSDPTSSKKDFSTAILERKKSPNRLIVDEALNDDNSVVSMHPAKMEELQLFRG
DTVLLKGKKRKDTVCIVLADDQCEEPKIRMNKVVRANLNIRLGDVVSVQQCPDVKYAKRV
HILPIDDTVEGLTGNLFDAYLKPYFLESYRPVRKGDLFVVRGGMRIVEFKVVETEPGEYC
VVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKAIGV
KPPKGILLYGPPGSGKTLIGRAVANETGAFFFLINGPEIMSKLAGESEGNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEILRIHSKNMKLADNVDLERVARDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGASNPSALRETVVEVPNIS
WEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAMQRGHSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRLQ
IFKACLRKSPVSKDVDLAALSRYTHGFSGADITEICQRACKYAIRENIEKDIERKRKRSE
NPEAMDEDDSDEVAEIKPAHFEESMKYARRSVSDADIRKYQVFAQTLQQSRGFGTEFKFA
EHAANTTATGATTNPFASANAAGDDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccaacttgttccacttccgacccgacaagtagtaaaaaagatttttcaact
gcaattttggagaggaagaaatcccctaaccgccttattgttgatgaggccttaaatgat
gacaattcagtggtatctatgcatcctgctaaaatggaagagctgcaactatttcgagga
gataccgtcttgctaaagggtaaaaaacggaaggacactgtttgcattgtccttgcagat
gatcaatgtgaagaacctaagatcagaatgaacaaagtagttcgagctaatcttaatatt
cgtcttggggatgttgtatctgtacagcagtgtcctgatgttaagtatgcgaagcgtgtt
cacattcttccaattgatgacacagttgagggtctcactggcaacctgtttgatgcgtac
ttgaagccatacttcttggagtcttaccgtcctgtcaggaagggcgatctcttcgtagtc
agaggtggtatgcgcattgttgaatttaaagtggttgagacggagcctggagaatattgt
gttgttgcacctgatacagagatcttttgtgagggagaacctgtcaagcgtgaagatgag
gagagactaaatgaagttggatatgacgatgttgggggtgtgaggaagcaaatggctcag
attcgtgagctcgttgaactccctctgaggcatcctcagctattcaaggcaattggtgtg
aaaccaccaaaaggtattctcctgtatggtcctccgggatcggggaaaaccctgattgga
agagctgtggccaatgagacaggtgcatttttctttctgattaatggacctgaaataatg
tctaaattggctggtgagagtgagggtaacttgaggaaggcatttgaggaagccgagaag
aatgcaccatccatcatatttattgatgagctagactcaattgctccaaagcgagaaaag
acacatggtgaagttgagcggcgtattgtttcccaacttctgacattaatggatgggctc
aagtctcgatctcatgtgattgtcatgggggccaccaacagacctaacagcattgatcct
gctctcaggagatttgggagatttgaccgagagattgacattggcgtaccagatgaagta
gggcggttggagatcctacgtattcatagcaaaaatatgaagctcgctgataatgttgat
ctagaaagagttgcaagagatacgcatggttatgttggagctgatcttgctgccttgtgc
actgaggctgcgctgcaatgtatcagagagaaaatggatgttattgacttggaggatgag
actatcgatgctgaagttttgaattcaatggctgtcactaatgagcattttcaaactgct
ctgggtgcttcaaatccatcagcattacgtgaaacagttgtggaggttcccaacatctct
tgggaggatattgggggcctggacaatgtcaagcgggaacttcaagagactgttcagtac
ccagttgagcatcctgagaagtttgagaagtttggcatgtcaccctctaaaggggttctt
ttctatggacctcctggttgtggtaaaactttgcttgcaaaagctattgcaaacgagtgt
caggctaactttattagtgtgaaaggaccggagttgcttacaatgtggtttggagaaagt
gaagcaaatgttcgggaaatatttgacaaggcacggcagtctgctccatgtgtactgttc
tttgatgaacttgattccattgctatgcagagggggcattctgtgggagatgctggtggt
gctgctgatagagtactcaatcaattgttgacggaaatggatggaatgacggcaaagaaa
acagtattcatcattggggcaactaataggccagacattattgaccctgcactgctcaga
ccaggtcgtctagaccaattaatttacatccccctccctgatgaagcttcccgtcttcaa
atcttcaaagcatgtttgcggaagtcccctgtctctaaggatgtggatctggcagctctc
tcacggtatacacatggttttagtggtgcagacataactgagatttgtcagcgagcatgc
aaatacgccatcagagaaaacattgaaaaggatattgagagaaagagaaagaggagtgag
aaccctgaagccatggatgaagatgacagtgatgaagtggctgaaattaagcctgcacac
tttgaggagtccatgaaatatgctcgaagaagtgtgagtgatgctgacattaggaagtac
caggtttttgctcaaacattacagcaatcacgcggatttggaactgagttcaaatttgca
gagcacgcagctaatactacagcaactggggcaacaaccaacccattcgcttctgctaat
gctgctggagacgacgatgacttgtatagttaa
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integrated database retrieval system
