Nicotiana tabacum (common tobacco): 107802807
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Entry
107802807 CDS
T04643
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107802807
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107802807
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107802807
NCBI-ProteinID:
XP_016481867
UniProt:
A0A1S4AYX5
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Position
Un
AA seq
439 aa
AA seq
DB search
MAVSWRSCLSLLVVIMLAINNVTASTSPEEAKQFQSLNISTMANRLNEENVPNHEKHAVD
DPDMVASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWQRNRKRLADCAIGFGRN
AIGGRDGKYYVVTDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFK
TIDGRGVNVHIANGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPGHYGWRTMADGDA
ISIFGSSHIWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKI
MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPA
NPFAKQVTHRVEPSEGEWKRWNWRSDGDLMLNGAYFTPSGRGAGASYARASSLAAKSSSL
VGTLTSNAGALTCRRGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcttggagatcatgtctatcattgctagttgtgataatgctagccatcaat
aatgtcactgccagtaccagtcctgaagaagcaaagcaatttcagagcttaaacatctcg
acaatggcgaacaggttaaacgaagaaaatgtaccaaaccatgaaaaacatgctgttgat
gatccagatatggttgcttccatggtagacatgagcattcggaatagtacagagaggagg
aaattgggttttttctcatgtggaactggaaatcctattgacgattgctggcgctgtgac
cgcaattggcaacgtaaccgcaagcgcctagccgattgtgctattggatttggacgcaat
gccattggtggccgcgatggcaagtactacgttgtcactgacccaggtgacgatgacccc
gtaaatcccagacctggaacacttcgtcatgctgtaattcaggacagaccattgtggatt
gtgtttaaacgggacatggtcattacacttaagcaagagcttataatgaacagtttcaag
acaattgatggacgtggtgtgaatgttcatattgccaatggggcttgcataactgtccaa
tttgttactaatatcattattcatggcatcaatattcatgattgtaaaccaactggtaat
gccatggttcgtagctcgccaggtcactatggttggaggacaatggctgatggtgatgcc
atttccatctttgggtccagccacatttgggttgaccacaactctctcgctaactgtgct
gatggcctcattgatgctatcatgggatcaactgcaattaccatctccaacaattatttt
acccatcacaatgaggtgatgctattgggtcacagcgactcctatgttagagacaagatt
atgcaagtgactattgcctacaaccattttggtgagggtctcattcagagaatgccaagg
tgtagacatggttatttccatgtggtgaacaatgactatacacactgggagatgtatgct
attggtggcagtgcttctcctacaattaacagccaaggcaacagataccttgccccagcc
aacccatttgccaaacaggtgacacatagagtggaaccatcagaaggagagtggaagcgt
tggaactggagatcagatggagaccttatgcttaatggagcctactttaccccatccgga
cgtggtgctggagccagttatgctagggcatcaagcttagcagccaagtcctcttcacta
gttggcactcttacctcaaatgctggtgcacttacctgccgcaggggccgccaatgttaa
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