Nicotiana tabacum (common tobacco): 107803079
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Entry
107803079 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107803079
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107803079
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
MCM3AP_GANP_C
Motif
Other DBs
NCBI-GeneID:
107803079
NCBI-ProteinID:
XP_016482167
UniProt:
A0A1S4AZQ3
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All DBs
Position
21:complement(37673038..37683147)
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AA seq
444 aa
AA seq
DB search
MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTIADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL
IPELGPCSLKITYSAHTDLSVKFQSHRSRDYTNPLLPVAPSAIDASGQISVGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHMVFSAFGPVLKIAMFDKNGGVQALIQYPDVQTSVVAKE
ALEGHSIYEGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNAPMLNSQPSVLGQQPHPVG
GPGVHPYNGPTQYAPAPQDHAAPQHTAGWNSPVGAAPQQIPMQMQNHPYSMPASGPPQMG
HGMLSLHGQNSLPHSAGMPPYHPQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgtatctagccagcctcagttccgatacacacagcctccctctaaggttcta
catttaagaaacttaccatgggagtgcacagaggaggaacttatcgaattggggaagcca
tttggtaaagttgtcaacaccaagtgtaatgttggagcaaatagaaatcaagcatttata
gagtttgcagaactgaatcaagctattgcaatgatatcgtactatgcgtcttcctcagaa
ccagctcaggtacgagggaaaaccgtctacctacagtattccaacagacaagagatagtg
aacaacaaaactattgccgatgtagctggaaatgtattgttggtaacaattgagggaaat
gacgcacgtcttgtcagtattgatgttctacacttggtgttctcagcttttggatttgtc
cataagattactacatttgagaaaactgctggattccaggctctagtgcaattttctgat
gcagaaacggccacttctgcaaaggatgcccttgatggaagaagcattcccaggtatttg
attccagaactgggaccttgctccctcaaaataacatattctgcacatactgatcttagt
gtgaagtttcagagtcatcgtagcagggattacaccaatcctctccttcctgttgcaccc
tcagccattgatgcaagtggtcagatcagtgtgggtttagatgggaagaagctggagcct
gagagtaatgttcttctagcttccattgagaacatgcagtatgctgtaaccttggatgtc
ctacacatggttttttcagctttcggccctgtgctaaagattgcaatgtttgataagaat
ggtggggttcaggctctaatacaatatccagatgtgcagacatcagttgttgcaaaggaa
gctttggaaggacattccatatatgaaggaggattttgtaagcttcatatctcctactct
cgccacactgatctcagtattaaggtaaataatgatcggagcagagattatacaatcccg
aatgcccctatgctgaactctcaaccctcggttttggggcagcaaccacatccagtagga
ggtccaggtgttcatccatacaatgggcctacacaatatgccccagctccacaagatcat
gctgcacctcagcatacagctggctggaactcacctgttggggctgcacctcaacaaata
ccgatgcagatgcagaatcacccttactctatgcctgcaagtgggccgcctcagatgggt
catgggatgctttcattgcatggacagaacagcctaccacattctgccggaatgcctcca
tatcatccacaatag
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