KEGG   Nicotiana tabacum (common tobacco): 107803145
Entry
107803145         CDS       T04643                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107803145
   03015 mRNA surveillance pathway
    107803145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107803145
   03041 Spliceosome [BR:nta03041]
    107803145
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107803145
Spliceosome [BR:nta03041]
 Complex C
  Other components
   EJC/TREX
    107803145
SSDB
Motif
Pfam: Pinin_SDK_memA APH
Other DBs
NCBI-GeneID: 107803145
NCBI-ProteinID: XP_016482269
UniProt: A0A1S4B0A3
LinkDB
Position
Un
AA seq 281 aa
MASAVGEKTEEELRKELFELNRQQREITERLKDPRGLRRGGFSGGGGPRSFVANGGRQRG
LVRPAERNDAEDQPAPKRRISSAVVKIEEGEIADDVSGAPTDANKEDSAVEEGSSREAHV
RQNERKPSNWLRRDGNQRPSKMDSDVPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTLE
KFRKEDMQLSGSEAYMRRSDSLKRAEQRAREESEKLRQQEREQRDEKLKRDLTLRARLAA
KAEEKRLELLFLRWSEHHKKTSQFYKVISYFGPKCPYSQFY
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcgagcgccgtaggggagaagacggaggaagagctccgcaaagaactctttgaactg
aatcgtcaacaacgcgagataactgagcggcttaaggatccaagaggtcttcgccgcggt
ggattctccggtggcggtggtcctcggagttttgttgccaacggcggccgccaacgtggc
cttgttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaaggcgtatt
tcttcagctgttgtgaagattgaagagggggagattgctgacgatgtctctggagctcca
acggatgcaaataaggaagattcagctgtcgaggagggaagttcacgggaggcacatgtc
agacagaatgagagaaagccatccaattggcttcggagggatggcaatcaaagaccctca
aaaatggattctgatgttcctccaccggaacctgtgccgagagtgttgccaaaaaatgag
gatcctaaattggttagtaggaataagagaatgttgggacagctgctggggaccttggag
aagttccgaaaagaggacatgcagctttcagggagcgaggcttacatgcggaggtcagat
tctttgaaaagggctgagcaaagggcgcgtgaagaaagtgagaagttaagacaacaagag
cgtgagcagcgtgatgaaaagctgaaaagagatttgactcttcgagcacgtcttgctgct
aaagctgaggaaaagaggttggaattgctatttcttcggtggagtgagcaccacaaaaaa
actagccaattttataaggttatttcttattttggtccaaaatgtccatattcacaattt
tattga

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