Nicotiana tabacum (common tobacco): 107803694
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Entry
107803694 CDS
T04643
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107803694
Transcription machinery [BR:
nta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107803694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
Motif
Other DBs
NCBI-GeneID:
107803694
NCBI-ProteinID:
XP_016482949
UniProt:
A0A1S4B277
LinkDB
All DBs
Position
Un
AA seq
584 aa
AA seq
DB search
MRASNSKSFSCIHKTFWLWVLGCTSNGVSLSNPLSPPTHQHGLLHILGLFIDYNSSSYTV
KGKEALYDPARSLKPFINGDCEPSHSDPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGSP
SNIYGDIGSDKTGISPDGEKPSYLSTTRAPHFSLLMKNIDLLENMFADSEMSRLENDILV
QLEKLGALEFFHSRLSRTLHSTSPEVLDVPRELVEEIEKDDLVGNGIDKVVVRSRKKQER
NSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGV
KLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVL
YLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHAR
GIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVGSID
QKVGHCISAKVLELTPDKSIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFGLENH
QRKSLEEIGRLYGVSKEWIRRIERRALTKLRSADCFQDLTHYSV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcatcaaattccaagtctttctcttgcatccacaaaaccttttggctatgggtt
ttaggctgcacctcaaatggggtttctctgtccaaccccctttctcctccaactcatcag
catggccttcttcacattcttggactttttattgattacaactcatcttcatatacagtc
aaaggaaaggaggctttatacgatccagctcggtctctcaaaccttttatcaacggggac
tgtgaaccttcacatagtgatcctttcagagtgcggacttgtttatctgacccccaactg
tggacgagtgatatatcagtaactacagaaataaagacacgaatcggcagaggatcccct
agcaatatatatggagatattggcagtgataagactgggatatcacctgatggggaaaaa
ccatcatatttaagcacaaccagagcccctcattttagtttactaatgaaaaatattgat
ttgctggaaaacatgtttgctgattcagagatgtcaagattagaaaacgatattctggtg
caactagaaaagcttggagctttagaattctttcatagtcgtctctcaagaacacttcat
tctacttctcctgaagtgcttgacgtgccaagggagcttgttgaagaaattgaaaaagat
gaccttgttggaaatggaatagataaggtagtcgtacgttctagaaaaaagcaagagcgg
aattcaaggagaaacagagcatccggaattgctaatgacattattacagtgcatccacat
accaaaaacatccaggaggatatgcaacagccaaagttttattctgggaaaagaacacat
gcttctagaaataaaagacagaagatcgctaagaatgaggcagaaatgtcaagaggtgtt
aagctggtggccgaactggaaagaatcaggtcaatccttgaagaagaaactggtcgagta
gctagtttcagtagctgggcagaagctgctggagttgaacagaaggagttgcagcaccac
ttgcattttggttggtattgcagggatgagcttctgaaaagcacacggtccttagtcttg
tatttggcaagaaactacagggggcttggagtggcatttgaagacttaattcaggctggg
aacatgggtgtgctacaaggtgctgtaagatttgacgacactaggggatacaaattctca
acttacgttcagtattggataagaaaatcattgtcaaaattggtggcccagcatgctaga
gggatccgaattcccttcactatatgcaaagcaataaatcaaatacataaggctcgaaaa
gctctcagtaggagccatggaaaatttccaggtgataatgaaattgccaagtacacgggt
ctatctacggctaggattgcaatggctagtaaatgtctgagagttgtgggttcaattgat
cagaaagttggacattgcatcagtgcaaaagttttggaactcacaccagataaatcaatt
gtaagcccggaggaaactgtcattagggaagacataatagacaacatgtatgctcttttg
gaaagcttggatccaaaagagcagcaagtaatatattttaggtttggtcttgaaaatcat
cagcgcaaatccctcgaggagattgggaggctttatggagtaagtaaagagtggattagg
agaatagaacgaagagctctcacaaaattgagaagcgcggattgtttccaagatttaact
cattactctgtatag
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