Nicotiana tabacum (common tobacco): 107804209
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Entry
107804209 CDS
T04643
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107804209
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107804209
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107804209
NCBI-ProteinID:
XP_016483544
UniProt:
P40972
A0A1S4B3W9
LinkDB
All DBs
Position
Un
AA seq
397 aa
AA seq
DB search
MDVYRIRISVFFLLVLLTFAALTTATNIPRRQLSNKKYKGPCRAENAIDKCWRCDPNWAE
NRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKN
MKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRE
SEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEK
VMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQN
LLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctacagaataagaattagtgtattttttctccttgtgttactcacatttgct
gcattaacgacagcaacaaacatcccaagaaggcaactcagtaacaagaaatacaaaggc
ccatgccgggccgaaaatgcaatcgacaaatgctggcgatgcgacccaaattgggccgag
aatcgccagaaaatggccgattgcgcattgggctttggcagcaatgcgatcggaggaaag
ttgggccgaatttacgtcgtcacggacaattctgacgacgatgttgtcgatcctaagccc
ggaactctccgatatggcgttatccaaaaggagccattgtggatcatatttggcaaaaac
atgaaaattaagcttagtagggaacttatcgtgactagcaacaaaactatcgacggccga
ggatttaatgtccatatacaaaatggagctggcattaagatacaatctgcatccaatatt
attatttctaacctccgtattcacaatattgtacccaccccaggtggcctgctcagggaa
tctgaggaccacgttggtctaaggggtagcgatgaaggtgatggcatcagcatcttcagt
tcgcatgatatatggatcgatcacatttccatgtctcgtgcaaccgatggtcttatcgat
gctgttgctgcttccactaacattaccatatccaattgccacttcactgaccacgaaaaa
gtaatgttgttcggcgccaacgatcattacgtgcttgacaaggacatgaaaattacatta
gcgtacaaccactttggaaagaggttggatcaaaggatgccaagatgcaggtttggattt
ttccatctggtgaacaatgactacactcattgggagaggtacgctattggcggaagcagt
ggagccaccattattagccagggtaatcgatttattgctgaggatgaattgttggtgaaa
gaagtaacatatagagaaaaacttacggcgagtgtggcggaatggatgaaatggacttgg
atatcagatggtgatgatatggaaaatggtgctacatttacaccatctggtgaccagaat
ttactcgataaaattgaccatctcaatctgattaaaccagaaccttcttctaaagttgga
attcttactaagttttctggtgctctgtcttgcgtcaaaggacgtccatgctaa
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integrated database retrieval system
