Nicotiana tabacum (common tobacco): 107804415
Help
Entry
107804415 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107804415
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107804415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF617
Motif
Other DBs
NCBI-GeneID:
107804415
NCBI-ProteinID:
XP_016483789
UniProt:
A0A1S4B4L9
LinkDB
All DBs
Position
Un
AA seq
430 aa
AA seq
DB search
MFLRSLLILLLATSLFSTFCNGKKIGNPIKRGNSASKIVNVTKMPQAIIDIQAFGAKGDG
LTNDTEAFIKAWKKACKTENAVILVPRHKIYYVGPIKFHGPCKKGLRMMINGELRASKNI
SDYEQDKRHWLLFQNMENFTVEGVGSIDGNGEVWWKHSCKIDKTIPCNAKTLIAPTAMFF
NNCTNVTIRNLELKNPQKMHLTISKSEHVEVSRLRLTAPADSPNTDGIHVSGTKDIDIHH
CYIETGDDCISIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDAVSNIYVHDATLRGTT
NGLRIKSWQGGRGYAKNILFQDIDMVNVTNPIIIDQYYCDQEKPCKEQKEAVHVSNIMYK
NIKGTSSTHTAIKLNCSKTVPCQGIQMENVNIRYQEGSTVKALCANVKYTTKGIISPKCP
SEHPLAFLWN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttagaagccttcttatcttattactagccacttctttgttttcaaccttttgt
aatggaaagaagattggaaaccctataaaacgtggtaatagtgcatcaaaaattgttaat
gtgacgaaaatgccacaagcaattattgatatacaagcttttggagccaagggtgatgga
ctcacaaatgatacagaggcatttataaaggcttggaagaaggcatgcaaaacagaaaat
gctgtgattttggtgccaaggcacaagatatattatgttggaccaattaaatttcatggt
ccttgcaagaaaggccttagaatgatgataaatggagaactcagagcttcaaaaaacata
tcagattatgagcaagataaaagacattggcttttattccaaaacatggaaaactttaca
gttgaaggtgtaggcagcatcgatggcaatggagaagtatggtggaaacactcttgcaaa
attgataaaacaattccatgcaatgcgaaaacactaatagctccaactgctatgttcttt
aacaattgcacaaatgtgacaataagaaacttagagttgaagaacccacagaagatgcat
ttgacaatttctaaaagtgagcatgttgaggtttcaagattgagacttacagcacctgct
gatagccccaacactgatgggattcacgtttctgggactaaagatatagatattcaccat
tgttatattgaaacaggtgatgattgtatatcaatagtaaatggttccactaacgttaga
gcaagatatatacattgtggacctggccatggaatcagtattggaagcttgggaaaaaat
aaagaggaggatgccgtttcaaatatttatgtacacgatgccaccttgaggggaacaact
aatggattaagaataaagtcttggcagggaggacgtggatatgcaaaaaacattcttttt
caagacatagatatggtgaatgtgaccaaccccataatcatagatcaatattactgtgac
caagaaaaaccatgcaaagagcagaaagaagcagtgcatgtgagtaatataatgtacaaa
aatattaagggaacgagttctacgcatactgcaattaaattaaactgcagcaaaactgtt
ccatgccaagggatacaaatggaaaatgtgaacatacgttaccaagaaggttcaactgtc
aaagctttatgtgcaaacgtcaaatacacaacaaaagggataatttccccaaaatgccct
tctgagcacccgctagcatttttatggaattaa
DBGET
integrated database retrieval system