Nicotiana tabacum (common tobacco): 107804511
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Entry
107804511 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107804511
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107804511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
107804511
NCBI-ProteinID:
XP_016483906
UniProt:
A0A1S4B4Q5
LinkDB
All DBs
Position
Un
AA seq
442 aa
AA seq
DB search
MASGSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
ELAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPSYL
IPELGPCTLKITYSAHTDLSVKFQSHRSRDYTNPHLPIAPSAIDASGQFSLGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGVQALIQYPDVRTAVVAKG
ALEGHSIYEGGYCKLHVTYSRHTDLSIKVNNDRSRDYTIPNTPMLNSQPSIFGQQPQIGG
PGVHPYGGPAHYAPAPGVAPPQHSAGWNSAAATANPGMPMQMHSHPYMPPASVPPQMGSG
VMPMHGQNGIPYSTAMPPYHQQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggtctagccaaccccagtttcgatacacacagccaccatcaaaggtcctt
catttgagaaacttaccatgggagtgcacagaggaggagctgatcgaattggggaagcca
tttggtaaagtcgttaataccaagtgtaatgttggagcgaaccggaatcaggcatttata
gagttagcagaattaaatcaagctattgcaatgatatcgtactacgcctcttcctcagaa
ccggctcaggtacgagggaaaaccgtctacctacaatattctaacaggcaagagatagtg
aacaacaaaactacagcagatgtagctggaaatgtgttgttggttacaattgaggggaat
gatgcccgccttgtcagtattgatgttttacatttggtgttttcagcttttggatttgtg
cacaagattacaacatttgagaagactgccgggttccaggctctggtgcaattttctgat
gcagaaaccgctacttcagcaaaggatgccctggatggaagaagcattcccagttacttg
attccagaacttggaccatgtacgcttaaaatcacatattctgctcatacggatctgagc
gtgaagtttcagagccatcgtagcagggactacaccaatcctcaccttcccattgctccc
tcagccatagatgcaagtggtcagttcagtttgggtttggatgggaagaaactggaacct
gagagtaatgttcttcttgcttccattgagaacatgcagtatgcagttaccttggatgtc
ctacacacggttttctcagctttcggtcctgtacttaagattgctatgtttgataagaat
ggaggggttcaggctctgatacaatatcctgatgtacgcacagctgttgttgcgaaggga
gctttagaaggacattccatatatgaaggtggatattgcaagcttcatgtcacttactct
cgacacactgatcttagtataaaggttaataatgatcgcagcagagattacacaatccca
aatacccctatgttgaattctcaaccttcaatctttgggcagcagcctcagataggaggt
ccaggtgttcatccatacggtggccctgcccattatgctccagctccaggtgttgctccg
cctcagcattctgcaggctggaactctgctgccgccacagcaaatccaggaatgccaatg
cagatgcatagtcacccttacatgccacctgctagtgtgcctcctcagatgggctccggg
gtgatgccaatgcatggacagaatggcataccttattctactgcaatgcctccttatcat
caacagtag
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