Nicotiana tabacum (common tobacco): 107804674
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Entry
107804674 CDS
T04643
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107804674
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nta01002
]
107804674
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107804674
Enzymes [BR:
nta01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107804674
Peptidases and inhibitors [BR:
nta01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107804674
Ubiquitin system [BR:
nta04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107804674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107804674
NCBI-ProteinID:
XP_016484081
UniProt:
A0A1S4B5D2
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All DBs
Position
13:complement(117080443..117099622)
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AA seq
1116 aa
AA seq
DB search
MTLMTPPPVDPEEDEMLVPNSDFPVEGPQPMEVATADTASTVDGPPVDDPPSARFTWTIE
NFSRLNSKKLYSDVFHVGGYKWRILIFPKGNNVDHLSMYLDVADSPALPYGWSRHAQFSL
AVLNRVHNKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPIRGYLVDDTVIVEADVAVR
RVIDYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYFIPYFRKAVYHMPTTENDNPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEKYGLQDARKGVLFIDFPPVLQLQLKRFEYDFVRDTMVKINDRYEFPLELDLDRE
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDSK
RALEEQYGGEEELPHANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RVRLKKEQDEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKDIYFDLVDHDKVRSFRIQK
QMAFTQFKEEVAKELGIPVQFQRYWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKA
NNAELKLYLEVEFGLDLRPCPPPEKTKEDILLFFKLYDPLKEEMRYVGRLFVKGSGKPLE
ILTKLNELAGFSPDEEIELFEEIKFDPNVMCEPIDWKLTFRGSQLEDGDIICIQKPLRSQ
TSEQYRFPDVPSFLEYVHNRQVVRFRSLEKPKEDDFSLELSKQNNYDEVVERLARHLGLD
DPSKIRLTSHNCYSQQPKPQPIKYQGVDRLTEMLVHYNQTSDILYYEVLDIPLPELQCLK
TLKVAFYNSAKDEVTIHTIRLPKQSTVDDVLNHLKTKVELSHPDAELRLLEVFYHKIYKI
FPPTERIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQAHVQNFGEPFF
LVIHEGETLTEVKARIQKKLQVPDEEFSKWKFAFLSMGRPDYLQDSDVVSNRFQRRDVYG
AWEQYLGLEHADNAPKRSYASNQNRHTFEKPVRIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccagtagatccagaagaggacgagatgctcgttcctaat
tcagattttcccgttgaaggtcctcagccaatggaagttgcgactgcggatacagctagt
acggtggatggaccgccagtggatgatccgccatctgctcggttcacatggacaatagag
aacttttcaaggttgaattcaaagaagctatactcggatgttttccatgtgggaggatat
aaatggaggatattgatatttcctaaagggaacaacgtggaccatttgtctatgtattta
gatgttgcagattcgccggcattgccttacgggtggagtagacatgctcagtttagctta
gctgttctcaaccgagtccataacaagtttacagtgagaaaagatactcaacaccagttt
aatgcaagagagagtgactggggtttcacgtccttcatgcctcttagtgaattatatgat
cctatcagaggttatcttgtggatgatacagtaatagttgaagctgatgttgctgtgcgt
agggtcattgattactggtctcacgactcgaagaaggagacgggttgtgttggccttaag
aatcagggagctacttgttatatgaactctctcctccaaacattgtactttattccttac
tttagaaaggctgtgtatcatatgccaacaactgagaatgacaatccatccgggagcatc
cctttggctcttcagagtttgttttataagctacaatacagtgacactagtgtagcaaca
aaagaattgacaaagtcctttggatgggatacctatgattctttcatgcagcatgatgta
caagaacttaacagggttctttgtgaaaaacttgaagataagatgaagggaaccgttgta
gagggcacaatacaacaattattcgaggggcatcatatgaattatattgaatgtatcaat
gtggactataaatcaacaagaaaagaatctttttatgatttgcagcttgatgtcaaaggg
tgtcgtgatgtctatgcttcttttgacaagtatgttgaagtagaacgccttgagggtgat
aataagtaccatgcagaaaagtatggtttacaggatgctcgaaaaggtgtgcttttcatt
gatttcccccctgttcttcagcttcagttaaaacgatttgaatatgattttgttcgggat
actatggtcaagataaacgacagatatgagtttcctttagaactcgatcttgatagagag
aatggcaaatacttatctcctgatgcagatcgaagtgttcgcaatctctatacgcttcac
agtgttctggttcatagtggtggggtccacgggggacactattatgcttatatcaggcca
acactctctgatcaatggtttaaatttgatgatgagcgtgtgacaaaagaagattcgaag
agggctttggaagaacaatatggtggtgaggaagagttacctcatgcaaaccctgggttc
aacaattcaccgttcaaatttacaaaatattcaaatgcatatatgcttgtttatatacgt
gaaagtgacaaagaaaagattatatgcaatgtggatgaaaaggacatagcagagcatctc
agggtaaggctgaagaaagagcaagatgaaaaggagcaaaagagaaaggaaaaagcagag
gctcacctttatacaataatcaaggttgctcgcgatgaagaccttggtgaacaaattgga
aaggatatttattttgatctcgtagatcatgacaaagtccgtagtttccgtatccagaaa
cagatggcatttacacaattcaaggaggaagttgctaaggaattgggtataccggtgcaa
tttcagcgttattggctatgggcaaaacgacaaaaccacacttatcggcctaatcggcca
ttgacacctcaagaggaagctcaatctgttggacaactgagagaggtctctaataaagca
aataacgctgagctaaaactttatttggaagttgaatttggcctggatttgcgaccttgt
cctccacctgagaagaccaaagaagatattcttctatttttcaaactgtatgaccctctg
aaagaggagatgaggtatgttgggcggctctttgtaaaaggtagtggcaagccattggag
atattgaccaagctaaatgagctggctggcttttcgcctgacgaagagattgaactcttt
gaggaaataaaatttgatcccaacgtgatgtgtgaacccattgactggaagctaacattt
cgcggcagtcagcttgaagatggggacattatttgcattcagaaaccccttcgaagtcaa
actagtgaacaatatcgatttcctgacgttccttcatttttagagtacgtgcacaatcgc
caggttgttcgcttccgctcattggagaaacccaaggaggatgatttcagtcttgagttg
tcgaagcagaacaactatgatgaagtagttgaaagattggctcgccatcttggcttggat
gatccatcaaaaataaggcttacgtcacataactgctactcacagcagccaaaacctcag
ccaataaagtatcaaggagtggaccgtcttacagaaatgcttgttcactataatcagact
tcagacattttgtattatgaagtcctcgatattccgttaccagagctgcagtgcttaaaa
actctcaaagtcgccttctataattctgcaaaagatgaagtgacaatccatactattaga
ttgccgaaacaaagtactgtagatgatgtccttaatcatctcaagacaaaggttgagttg
tcacatccagatgctgaactgagattgctggaagttttctaccacaaaatatataagatt
tttccaccaactgagagaattgagaacataaatgatcaatactggaccttgcgtgcagag
gagatccccgaagaggagaaaaacctgggtcctcatgatcgcttgattcatgtttaccat
tttatgaaggacacgactcaaaatcaagcacacgtacaaaactttggggagccctttttc
ctggttattcatgagggtgagacactgactgaagttaaagcgcgcatccagaaaaaattg
caggttccagatgaggagttttcgaagtggaagtttgcgtttttgtccatgggccgtcct
gactacctccaggattcagatgttgtgtccaatcgctttcagaggagagatgtttatggt
gcttgggagcagtatcttggattagagcatgctgacaatgctcctaaaaggtcatatgct
agcaaccagaaccgacatacttttgagaagcctgttcggatctacaactaa
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integrated database retrieval system
