Nicotiana tabacum (common tobacco): 107804795
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Entry
107804795 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107804795
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107804795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
107804795
NCBI-ProteinID:
XP_016484217
UniProt:
A0A1S4B5U3
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MSSSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTIDVLHTVFSAFGAVQKIAIFEKNGQTQALIQYPDVTTAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNIQQAYSDKSRDYTVPESSLLAMQQVSAVHATPPV
WHNPQSGPQSFGYAAAGAVPGQASTSQMSSWNPNLQGGGSTFPSTPTRFHGQSYASPVSA
YATAVNPPGSSQQTNHIVSSDRSYSVSQPPHPSTMPPPGHAPYHG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatccgggcaacagcagttccgatacacacagacgccgtcgaaagttcttcac
cttcggaatttgccatgggattgcagcgatgaagagcttgtagagctttgcaagcccttt
ggtaaaattgtcaacaccaagtgcaacgtcggggccaaccgcaaccaagcctttgtcgaa
ttcgcagaccttaatcaggcaattaatatggtttcatattatgcctcgtcttcagagcct
gctcaagttcgtggcaagactgtatacatccagtattctaacaggaatgagattgtcaat
aataagagtcctggagatgttccaggaaatgttttgctggtaactattgagggtgttgaa
gctggtgatgtcagcatcgatgtgattcatttggtgttttcagcctttggttttgtgcaa
aagattgctacttttgaaaaggcagcaggttttcaggcattgattcaatttagtgatgtt
gggacagcatctgctgctagagaggcactggatgggagaagtataccaaagtacctgctt
ccggaacatgttaatcattgtcacttgcgcatctcatactctgcacacacggaccttaat
atcaaatttcaatctcatcggagcagggactatacaaacccttatctcccagtaaatcct
actgcaatggaggggcttcttcagcctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctttttgcctctctagaaaatatgcagtatgctgttactattgatgtc
cttcacacggtattctctgcatttggcgctgtccaaaagattgctatatttgagaagaat
ggtcaaacccaggcattaattcagtatcctgatgtaacaactgcagctgctgcaaaggac
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatatacagcaggcatacagtgacaaaagtagagattacacagtt
ccagaatcaagtttgcttgcaatgcaacaagtatcagcagtccatgccacaccaccagtt
tggcataaccctcagtctggtccacagtcatttggctatgccgctgctggtgctgttcct
ggccaagcatctacatcccaaatgtcctcatggaatccaaatttgcagggtggcggatca
acctttccgtctactcctaccagatttcatgggcaatcatatgcttcaccggtttctgct
tatgcaacagcagtaaatcctcctggatcgtcacagcagaccaatcacattgttagtagt
gatcgatcttatagtgtaagtcagcctcctcatccatcaaccatgccacctcctggtcat
gcaccttatcacggttaa
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