Nicotiana tabacum (common tobacco): 107805127
Help
Entry
107805127 CDS
T04643
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107805127
09123 Folding, sorting and degradation
03018 RNA degradation
107805127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107805127
03041 Spliceosome [BR:
nta03041
]
107805127
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107805127
mRNA degradation factors
5'-3' decay
Lsm complex
107805127
Spliceosome [BR:
nta03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107805127
Complex C
U2 snRNP components
107805127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
LSM14
Motif
Other DBs
NCBI-GeneID:
107805127
NCBI-ProteinID:
XP_016484607
UniProt:
A0A1S4B6Y6
LinkDB
All DBs
Position
Un
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDEDKYPHMKSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcatatttcaaggatctggtaggcagagaagtgactgtggaactgaag
aatgacttggctatccgaggaacattacattcagttgatcagtatctgaacattaagctt
gaaaacacgagggttgttgacgaggacaagtacccccacatgaaatcagtgaggaattgc
ttcatcagaggatcggtggtgagatatgtgcagttacctccggatggagttgacatagaa
cttcttcacgatgctacaaggagagaagctcggggtggctga
DBGET
integrated database retrieval system