Nicotiana tabacum (common tobacco): 107805784
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Entry
107805784 CDS
T04643
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107805784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107805784
03009 Ribosome biogenesis [BR:
nta03009
]
107805784
04131 Membrane trafficking [BR:
nta04131
]
107805784
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107805784
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107805784
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107805784
Membrane trafficking [BR:
nta04131
]
SNARE
SNARE associated proteins
Others
107805784
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107805784
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107805784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_18
Parvo_NS1
ATPase_2
Viral_helicase1
nSTAND_NTPase5
ABC_tran
NB-ARC
AAA_7
NACHT
TsaE
Vps4_C
IstB_IS21
AAA_lid_PRS2_C
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
107805784
NCBI-ProteinID:
XP_016485355
UniProt:
A0A1S4B8U9
LinkDB
All DBs
Position
18:133993650..134001868
Genome browser
AA seq
806 aa
AA seq
DB search
MSHPAESSDSKNATKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRG
DTILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRV
HILPIDDTIEGVTGDLFESFLKPYFLEAYRPLRKGDHFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIGKDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVS
WADIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGSSGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSE
NPDSMDEDVDDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFA
EASGSTAAADPFATSNAGADDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacccggccgagtcatctgactcaaaaaatgctactaagaaggatttttctacg
gcaattttggagcggaagaaagctgcgaatcggcttgtcgttgacgaggcggtcaatgat
gataactctgttgttgccttacaccctgctactatggagaaacttcagcttttccgtgga
gatacgattctcatcaagggaaagaagagaaaggatacagtcgtcattgcccttgctgat
gaaacatgtgatgagccaaagattaggatgaacaaggtggtccgttcaaatttgagggtt
cgacttggagatgtcgtatctgtgcaccagtgtccagatgttaagtatgggaagcgtgtc
cacatacttcctatagatgatacaatagaaggtgtcacaggggatctgtttgaatcattc
ctgaaaccttactttttggaggcatatcgtcctttgaggaaaggggaccatttccttgtt
agaggagggatgagaagtgtggaattcaaggtcatagaaactgaccctggggagtattgt
gtcgttgctccagacactgaaatcttttgtgagggtgagcctgtgaaaagggaggatgag
gagagacttgatgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcag
attcgtgaactggtggaattaccattgaggcatcctcaacttttcaaatctattggtgtg
aaaccaccaaaggggattttactttatggacctcccggttctggaaagactctgatagca
agagctgttgctaatgaaacaggtgcatttttcttttgcattaatggtcctgaaataatg
tccaaattggctggagagagtgaaagtaatctcaggaaggcatttgaagaggctgaaaag
aatgctccttctatcatatttattgatgaaattgattcaattgctcccaagcgagagaag
acacatggtgaagttgaaaggaggattgtctcacaactcttgactctgatggatggactg
aaatcgcgtgctcatgtaatagtgatgggagctaccaaccgtccgaacagcattgatcct
gctctaagaaggtttggcaggtttgatagagaaatagacatcggtgttccagatgaagtt
ggacgtcttgaagttcttcgcattcataccaaaaatatgaagcttgcagaagaagttgat
ttggaaagaattggaaaagatacacatggttatgttggtgcagatcttgctgctctttgc
actgaagctgcacttcagtgtataagggagaaaatggatgtcattgatctggaagatgat
actattgatgctgagatattgaactcaatggctgtaacgaatgagcacttccaaactgct
cttggtacaagcaatccatctgcattgcgtgaaacagtggttgaagtgcctaatgtctcc
tgggcagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatat
ccggtggaacacccagagaagtttgaaaagtttggtatgtcgccttcgaaaggtgttctt
ttctatggccccccagggtgtgggaaaactctacttgccaaggcaattgcaaatgaatgt
caagccaatttcatcagtgtcaaaggtcctgaattgctcactatgtggtttggggagagt
gaggcaaatgttagggaaatttttgataaagctagacaatctgcaccctgtgtcctcttc
tttgatgagcttgattctattgctactcagaggggaggcagtagtggagatgctggtgga
gcagctgatcgtgttctgaaccaacttctgactgaaatggatggcatgaacgcgaagaag
actgtatttataattggggccacgaacaggcctgatataatagaccctgcacttctacga
cctggccgtcttgaccagttaatctatattcctctgccggatgaagattcacgccatcag
attttcaaggcgtgtctcagaaaatctcccttatcaaaggatgttgatttgagagctctt
gccaaatatactcagggatttagtggggctgatatcactgagatctgtcagcgagcctgc
aaatatgccataagggagaacatagagaaagacatagaaagggagaggagaagaagtgag
aatcctgattctatggatgaggatgttgatgacgaagtaccggagatcaagcccgcacat
tttgaggagtctatgaagtatgcacgacgaagtgttagtgacgctgatatacgtaaatac
caggcatttgctcagacattacagcagtctagaggttttggaacagaatttcggtttgct
gaggctagtggcagtactgctgcagccgacccttttgcaacttctaatgctggagctgat
gacgatgacctgtatagctga
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