Nicotiana tabacum (common tobacco): 107805827
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Entry
107805827 CDS
T04643
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107805827
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107805827
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
RsgA_GTPase
AAA_16
MeaB
AAA_18
AAA_30
Motif
Other DBs
NCBI-GeneID:
107805827
NCBI-ProteinID:
XP_016485398
UniProt:
A0A1S4B9C0
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All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
MAGSGGNPSSGEKSHQAPKILLAKPGLVSAGKFNRGGPDDPDSNAHRPRFGSLNLLSDTW
DFHSDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDATSPGVLPPFAIETEETRA
LSKHCTVGIEPRVSAERIILLDTQPVFSPSVLAEMIRPDGSSIVPIISGESLSAELAHEL
MSIQLGVLLASICHIILVVSEGVHDASMWRLMSTVDLLKHGIPDPSSLTLSHPQSSEKES
REKILDSGEEYMADPVFVHTKLPTEDLTPCNVVQLKKALTQIFCSLSILRSKNHTTAKES
HVSAVPLNSHSADRESEYLKLFLLPSRNKDESLKPQYESHISALWNLRDQVLSMRGPSFS
RTVSERDWLKNSAKIWEIVKNSPIMMDYCRTLQSSGMVRR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagtggtggaaaccctagttcgggcgagaagtctcatcaagctccaaaaatc
ctattagcgaagcctggacttgttagcgccggcaaattcaaccgcggcggccctgacgac
cctgattctaatgctcaccgcccacgctttggttctcttaatcttctctctgatacctgg
gatttccacagtgatcgttttctcccgtttctaacggataatacggactttacagtggtg
ggtgtgattggtcctccaggggttgggaagtccactataatgaacgaaatatatggtttt
gatgctacctcccctggagtgcttcctccctttgctatagaaacagaagaaacaagggct
ctgtcgaaacattgtacagttggcattgaaccgcgggtttctgctgaacggattatactg
cttgatactcagcctgtttttagcccttcggttttggctgaaatgattagaccagatggc
tcatccatcgtacccattataagcggcgaatctttatcagctgagctagctcatgaactg
atgagcatccagcttggtgttctgcttgcatccatttgtcacatcatattagtggtatca
gaaggagtccatgatgctagcatgtggcgactcatgtcaacggttgatttgctaaaacat
ggcatacctgatccatcatctttaaccctttcccatcctcaaagctctgagaaagaaagc
agagagaaaattctggacagtggagaagagtacatggctgatccagtttttgtgcataca
aaactacccactgaagatctaacaccatgtaacgttgttcaattgaagaaggcactcaca
caaatcttttgctctttatctattctgagatcaaaaaaccacacaactgccaaagagagt
catgtttctgctgttcctctcaactcacatagtgctgatcgagaatctgaatatttgaaa
ttatttctactgccatctagaaataaagatgaatccttgaagccacagtatgaaagccac
atttcagcattatggaatttgcgggatcaggttttgtcaatgagaggtccatctttctca
aggactgtgtccgagcgtgattggctgaaaaattctgccaagatatgggaaattgttaag
aattctcccattatgatggactactgtagaactcttcaaagttcaggcatggttaggagg
taa
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