Nicotiana tabacum (common tobacco): 107806489
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Entry
107806489 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107806489
03036 Chromosome and associated proteins [BR:
nta03036
]
107806489
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107806489
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107806489
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107806489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107806489
NCBI-ProteinID:
XP_016486133
UniProt:
A0A1S4BBD6
LinkDB
All DBs
Position
Un
AA seq
632 aa
AA seq
DB search
MASLSTPLRYSKMNSLFLLRNTSSSLTSKRVTLNSLSHIFTDKFIPRNGLKVSQIHSFTT
SVTPSAAVSNWVNGNFGYSVRAFNVAATAFVELEEECDVDNGVGLEISKLGISEEIVSAL
AQRGITSLFPIQKAVLEPAMQGSDMIGRARTGTGKTLAFGIPIMDKIIKFNNKKGRGRNP
LALILAPTRELARQVEKEFYESAPGLDTLCVYGGVPIQRQMSTLQRGADIVVGTPGRIID
LLKRRSLNLSEIQFVVLDEADQMLNVGFAEDVETILENVRQKHQTMMFSATMPSWIMKIT
NKFLKKPIHIDLVGDSDQKLADGISLYSIACEMRQKPAVLGPLISEHAKGGKCIVFTQTK
RDADRLASAMQKTLRCEALHGDITQSQRERTLSGFRQGQFNVLVATDVAARGLDVPNVDL
VIHYELPNSSEIFVHRSGRTGRAGKKGSAILMHSSKQHRDLKGIEHDAGCRFTELPSIKV
EAGAADMYSDMGKGSDRFGSYGGTMRSRSGDFGGSRSGGYGNKGSRFGGEGASSSRTGGY
SGTGSGRSGGGYGGTSSGSSGKFGGSGGSKRLGGFRNFGSGRSSRFGDSQSDRNNRSSRF
DDFGDGKDSGDQSSGRNSISRRRAPWDFSINR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctctccactcctttaagatacagcaaaatgaatagtctttttctactaaga
aacacttcatcttcactaacctcaaaaagggtcaccttaaattcactttcccatatcttt
actgataaattcattccaagaaatgggcttaaagtttcacaaattcacagctttaccact
tctgtaactccatcagcagcagtgtcgaattgggttaatggtaattttgggtatagtgtg
agggcatttaatgtggctgctactgcgtttgtagaattagaagaagagtgtgatgttgat
aatggggttgggcttgagatatcaaagctgggtatttctgaggaaattgtttctgctttg
gcacaaaggggaattacttctctttttcctattcagaaagctgttttggaaccagcaatg
caggggtcggacatgattggccgagctagaactggaactggaaagacactagcttttggc
attcctatcatggataagatcatcaaattcaacaacaaaaaaggacggggaagaaaccct
ttagcattgatcttggctcccactagagaacttgcacgccaggtggagaaagaattttat
gaatctgctcccggtttggatacactgtgtgtttatggtggtgtccccattcaacgccaa
atgagtactcttcaaaggggtgcagacattgttgttggaacacctggtcgaatcattgat
ctgctgaagaggaggtccttaaatttatcagaaatccagttcgttgttctagatgaagct
gatcagatgcttaatgtgggcttcgcggaggatgttgaaaccattcttgaaaatgttcgg
cagaaacatcagacgatgatgttttcagccacaatgccaagttggataatgaaaattacc
aacaagttcttgaagaagccaattcacattgatcttgtaggggattctgaccagaaatta
gccgatggcatttccttgtattcaattgcttgtgagatgcgtcagaaaccagcagttctt
ggacccttaatatcagagcatgcaaaaggaggcaagtgtattgtgtttacccaaacaaag
cgtgatgctgatagattggcgagtgcaatgcaaaaaactttgagatgtgaagctttgcat
ggggatatcacgcaaagccagagggagagaactctgtccggtttccgacaaggtcaattc
aatgtattagtggccactgatgttgctgctcgaggacttgatgtacctaatgttgatctg
gtgatacattatgaacttccgaactcttcagagatctttgttcatcgatctggtcgaacc
ggacgtgctgggaagaaaggaagtgccattctcatgcattcctcaaaacagcacagggat
ttgaaaggtattgaacatgatgccgggtgcagatttactgagctcccaagtattaaagta
gaggctggagcagcagacatgtatagtgacatgggcaaaggcagcgaccgctttggctcc
tatggaggcaccatgcgtagtcgatctggtgattttggtggaagtcgttctggtggctat
ggaaataaaggcagcagatttggtggagaaggcgcttcatcttctcgaacaggtggatac
agtggaactggttctggaagatcagggggtggctatggtggaactagctcaggcagctca
ggaaagtttggtggttctggaggatcaaaacgtttgggtggtttccgtaactttggttct
ggccgttcaagtagatttggagattcacagtctgaccgcaataaccgttcaagccgtttt
gatgacttcggagatggcaaggatagtggtgatcagagttcagggaggaactccatttca
aggaggcgtgccccctgggacttctccattaatagatga
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