Nicotiana tabacum (common tobacco): 107806631
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Entry
107806631 CDS
T04643
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107806631
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107806631
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107806631
NCBI-ProteinID:
XP_016486309
UniProt:
A0A1S4BBN9
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All DBs
Position
Un
AA seq
396 aa
AA seq
DB search
MGISKTKINGLIVLLFFTFVAVGTAVPDNSTRRHLSKKYKGPCVAANLIDKCWRCDPRWA
DNRQKYADCAMGFGRTAIGGKGGRIYVVTDPSDNNVENPVPGTLRHAVIQKEPLWIIFSK
HMKIKLNRELLMQSYKTIDARGHNVHIENGAGIKMQGVNNIIITNLHIHNIGPSSGGMIR
DSIDHIGIRGADEGDAISIFASHDIWIDHVSMSRAADGLIDAVQGSTGITISNCHFTDHD
KVMLFGANDNYLDDKKMQITLAYNHFGKRLDQRMPRCRLGFFHLVNNDYTHWMRYAIGGS
SEATIISQGNRFIAQHNVDIKEVTHREKAQESEWRHWTWLSRDDDMQNGAFFRTSGDPNA
LSKFKNLNLMPAEPSYRVGILTKFSGSLGCTVGRPC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctcaaaaacaaaaatcaatgggcttattgtcctcttattcttcacatttgtc
gcagtagggacagcagtgccagacaacagcacaagaaggcacttgtccaaaaaatacaaa
ggaccatgtgttgctgcaaatcttattgacaaatgctggagatgtgaccctcgttgggct
gataatcgccaaaaatatgctgattgtgccatgggttttggccgtactgctattggagga
aaaggtggaaggatttatgtagtcacagatccttctgacaacaacgtcgaaaatcccgtg
ccaggtaccctaaggcatgcagtgatccagaaggaacccttgtggatcatattctcaaaa
catatgaaaattaagttgaacagggaactgcttatgcaaagctacaaaaccattgatgca
cgtggacacaatgtccatattgaaaatggagctggaattaagatgcaaggtgtaaataac
attattatcactaatcttcacattcacaatattggaccttcttctggtggcatgatcagg
gactcaatagaccacataggtatcaggggtgcagatgaaggagatgctattagcatcttc
gcttctcatgatatttggatcgaccacgtgtcgatgtcacgtgccgcggatgggctcatt
gacgccgtccaaggatcaactggtattactatctccaattgccactttactgaccacgat
aaagtaatgttgtttggtgcaaatgataattacctcgacgataagaaaatgcaaatcaca
ttagcgtacaaccactttggtaagaggttggatcaaaggatgccaaggtgcaggcttgga
ttcttccatcttgtcaacaacgattacacccattggatgaggtacgccattggcggtagc
agtgaagcaacaatcattagccagggtaatcgttttattgctcaacacaatgttgatatt
aaagaggtgacacacagggaaaaggcacaagaatcagaatggagacactggacttggtta
tcacgagatgatgacatgcaaaatggtgcattctttagaacttctggtgatccaaatgca
ctaagcaaattcaagaacctcaatttgatgccagcagaaccatcttacagagttggaatt
cttactaagttttcaggatcactcggttgcacagtaggacgcccatgctag
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