Nicotiana tabacum (common tobacco): 107807428
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Entry
107807428 CDS
T04643
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107807428
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107807428
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107807428
NCBI-ProteinID:
XP_016487279
UniProt:
A0A1S4BEF7
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All DBs
Position
Un
AA seq
414 aa
AA seq
DB search
MAMTTIGLVLILVLYSALVITCNAAVVGGLLPQPAGGNNIADQTIFNVLNFGAKPNSELI
STQAFMRAWRAACDFNGRARLFVPPGVYNLAETIFSGPCKGTHPIIVQIAGTLKAVADVS
EYSNFAWISFDSINGIIITGGGTLDAQGQALWQFNDCKSNSNCVHLPATLFFNGVENGKV
MRLNLINSMGFHIHITNSYLVRFHALTIDAPENSPNTDGIHISKSNTIKLSRSVIRTGDD
CVSFGQGATNVTVNKVTCGPGHGISIGSIGKLSGELEIRGLIVKNCTLRGTTNGIRIKTF
AGANPNRAIGMMFSDIVMENVKNPIIIDQSYGDKSTEPSQVRISDVIYQNIRGTTISEVA
VQLMCSARLPCLNVRLTNINLKHIANTPITSQCQNANVGYTGIQFPPPCHALSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgactacgattggtttagtcctcattcttgtgttgtattcagctttggttatt
acgtgcaatgcagctgtagttggtggccttcttcctcaacctgcaggtggcaataatatt
gctgatcaaaccatttttaacgtcttgaattttggtgccaaacctaactcagaactcata
agcacacaggcatttatgagggcatggcgagcagcatgtgatttcaatgggagagcaaga
ctttttgtcccacctggagtatataatctagcagagaccatattttcaggaccatgcaaa
ggaacacatcctataattgttcaaattgcaggaaccttaaaagctgtggctgatgtttct
gaatattcaaattttgcttggatctcttttgattcaattaatggcattatcattactggt
ggaggcactttagatgctcaaggccaagctctttggcaatttaatgactgtaaaagcaat
tctaattgtgttcacctccctgctacattatttttcaatggtgtagagaacggaaaagtg
atgaggctgaatttgataaatagcatgggatttcatatacatattactaatagctattta
gtaaggtttcatgcccttaccattgatgctccagaaaacagcccaaatactgatggcata
cacataagcaaatctaacactataaaactctccagaagtgtaattagaacaggggatgat
tgtgtctcatttggacaaggagcaactaatgtgaccgttaacaaagtcacctgtggccct
ggccatggcattagtataggtagtattggtaagttgtctggcgaactggaaattagagga
ctcatcgtgaagaattgcacgttgaggggcacaacaaatggtatcagaattaaaactttt
gcaggggcaaatcctaacagagcaatagggatgatgttcagcgatattgtcatggaaaac
gttaaaaatccaatcatcattgatcagagttatggtgacaaatccaccgagccatcacaa
gtaagaataagtgatgtaatttaccagaatataaggggaacaacaataagtgaagtagca
gtgcaactgatgtgcagtgcacgactcccttgcctaaatgttcgacttaccaacataaat
ttgaagcatatagcaaatacgccaattacttcgcaatgccaaaatgcaaatgttggctat
actggcatccaattcccacctccttgccacgcactctcttcatag
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