Nicotiana tabacum (common tobacco): 107807683
Help
Entry
107807683 CDS
T04643
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107807683
09122 Translation
03013 Nucleocytoplasmic transport
107807683
03015 mRNA surveillance pathway
107807683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107807683
03041 Spliceosome [BR:
nta03041
]
107807683
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107807683
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
Cap binding complex
107807683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
107807683
NCBI-ProteinID:
XP_016487600
UniProt:
A0A1S4BFB3
LinkDB
All DBs
Position
Un
AA seq
848 aa
AA seq
DB search
RSSLCFQGGLLIWVSTPELCAKFCAFLPIPWQFLLQCAEQLPHKIPLYGTLVGLLNLENE
EFVAKLVENAQINLQDALETGKCNKIRILMRFLTVLMCSKVIQPSALVVIFECLLSSSAT
TVDEEKGIPSWQARADFYITCILSCLPWGGAELVEQVPEEIERVMVGVEAYLSIRKRVSD
AGFSVFEDIEETNNAVNEKDFLEDLWSRVQDLSSREWKLDSVPRPHLSFEAQLVAGKSHD
LAPVSCPEQPGPSGVLSGIAFGRQKHEAELKYPQRIRRLNIFPSNKTEDIQPIDRFVVEE
YLVDVLLFLNGCRKECTSYMVGLPVPFRYEYLMAETIFSQLLLLPQPPFKPTYYTLVIID
LCKALPGAFPAVVAGAVRALFDKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAHVLD
LPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENTPALEELLPPRGGPQFKYSEEDGTDPT
ERALSVELKDMVKGRKSAREMISWVEENVFPAHGFDITLRVVVQTLLDIGSKSFTHLITV
LERYGQVIAKICTDDDQQFKLISEVSSYWQNSAQMTAISIDRMMSYRLISNLAIVRWVFS
SSNLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLERSVVLAEEAASRARYQLDSAE
SKLSIMDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKEALLARAVDEIKVLILS
LYKGFLTALAEPLNDAFRDGTLRPSGQADEMNIDLEDSSVMDLDKDDGGRPKKSYSHPNG
SREINGYNLDGKQQWCLSTLGYLKAFTRQYASEIWQNIEKLDAEVLTEDAHPLFRKAIYC
GLRRPLDE
NT seq
2549 nt
NT seq
+upstream
nt +downstream
nt
agagatcaagtttatgcttccaaggaggcttattgatatgggtttctactcctgagttgt
gtgctaaattttgtgctttcttgcctatcccttggcagttccttctccagtgtgctgagc
aattgcctcacaagattcctctgtatggaacgctggtaggccttttgaatttggaaaatg
aggaatttgtcgcgaaattagtggagaatgctcaaattaatttacaggatgccttggaga
ctggaaagtgcaacaagatccgtatattgatgaggtttctgactgttttgatgtgcagca
aagttatccaaccgagtgcattagtggttatttttgaatgtttattatcatcatcagcga
ctactgtggacgaggaaaaaggaattccctcttggcaagcacgtgctgacttttatataa
cttgtattttatcatgccttccttggggtggagctgaacttgttgagcaagttcctgagg
agattgaaagggttatggttggagtagaagcctatttaagtattcgaaaacgtgtatctg
acgctgggttttctgtctttgaggatattgaagaaaccaataatgccgtcaatgagaagg
atttcttggaggatttgtggtctcgagttcaagatctttctagtagagagtggaaacttg
atagtgttcccagaccgcacctctcttttgaggcacaattagttgctggaaagtctcatg
atttggctccagtaagctgccccgagcaaccaggtccttctggagttttatctggaattg
ccttcggtagacaaaagcacgaagctgagttaaaatatcctcagaggataaggaggctta
atatatttccgtcaaataaaactgaggatattcaacccattgatcgctttgttgtggaag
agtatttggtggatgtgcttttattcttgaatggatgtcgaaaggaatgcacttcataca
tggttgggctgcctgtaccattcagatatgaatatcttatggctgagacaatattctctc
agcttcttctgttacctcaaccgccattcaaaccgacatattacacattggttatcatcg
atttatgcaaggctctgccaggggcctttccagcggttgtagctggggctgtccgtgctc
tttttgataaaatagcagatttagacatggaatgccgaacacgtctcatcctttggttct
cgcatcatttgtcaaactttcaatttatctggccatgggaagaatgggctcatgttttag
atctgccaaaatgggccccacagcgtgtgtttgttcaagaggttttggaaagagaagtcc
gtctttcatattgggacaaaatcaagcagagcattgagaacacccctgctttggaggagt
tacttccaccgagaggtggaccacagtttaaatatagtgaagaagatggtaccgatccaa
ctgagcgtgcgctctctgtagagctgaaggacatggtgaaaggtcggaaatctgcccggg
aaatgatttcctgggtagaagaaaatgtttttccagcccatggttttgatatcaccctca
gagttgttgttcaaacgcttcttgacattggatccaaaagctttactcatttgatcactg
tcttggagagatatggccaagtcatcgcaaagatttgtactgatgatgatcaacaattta
agctgattagtgaagtaagttcttactggcaaaacagcgctcaaatgacagctatatcca
ttgaccggatgatgagttatcggcttatatctaatttggccatagtgagatgggttttct
cttcatcgaaccttgatcgatttcatgtctctgacagtccatgggagatcctcaggaatg
ctgtcagtaagacgtataatcggatttctgatctgaggaaagagatttcatcccttgaga
gaagtgtcgtcttggcagaagaagctgcatctagagccagatatcagttagattctgcgg
agtctaagctgagtatcatggatggggaacctgttcttggtgaaaaccctgtaagaataa
aacggctgaaatcatatgcggaaaaagcaaaagaggaagaggtgtctgttcgtgaatctt
tagaagcaaaggaagctcttcttgctcgagcagttgatgaaattaaggttttgatccttt
cattgtataaaggcttcttgactgctttagcggaaccccttaatgatgcattcagagatg
gaaccttgcggccctctggtcaggcagatgagatgaacattgaccttgaagattcttctg
taatggacttggacaaggatgatggtggaagacctaagaaaagttacagtcatcctaatg
ggagcagagaaataaatggctataatcttgatggaaaacagcaatggtgtttatcaactc
tgggttacctcaaggccttcacaaggcaatatgcttcggagatatggcagaatattgaga
agttggatgctgaggtactaactgaagatgctcatcctctatttcgaaaagccatatact
gtggcctgcgaagacctctggatgaatga
DBGET
integrated database retrieval system
