Nicotiana tabacum (common tobacco): 107807691
Help
Entry
107807691 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107807691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107807691
03009 Ribosome biogenesis [BR:
nta03009
]
107807691
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107807691
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
U1 related factors
107807691
Complex B
107807691
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107807691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107807691
NCBI-ProteinID:
XP_016487612
UniProt:
A0A1S4BFE9
LinkDB
All DBs
Position
4:complement(39092077..39098520)
Genome browser
AA seq
645 aa
AA seq
DB search
MSYSNYDSRYGDSSSYRQRRSDLVGPPHIYSRPMPGGAAASYGRGGPLPYGGPQAPPMDA
GARGGSGMGGSGPVAGGSNGYPPFEGGFSRGSGMGRDSGFGGDRVTNGGMGDRPGRFGAG
SNNTGSRSGGRGGRDFDGGYSGGRGGGRFSSDRGRGSSGGRGGRHGSSRDDLDNLTLPKV
DFGNLVPFEKNFYVEHHSVRAMAEEDVALYRARREITVEGHDVPRPIQMFHEANFPDYCL
EVISRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVRAQRLAHGDG
PIVLVLAPTRELAVQIQKEAVKFGSRANISSTCIYGGAPKGPQIRDLKRGVEIVIATPGR
LIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVE
TLARQFLRNPYKVIIGSPDLKANQSIRQIVEVVTDLEKYRRLIGLLKEMMDGSRILIFVE
TKKGCDQVTRQLRMDGWPALSIHGDKSQDERDWVLAEFKNGRSPIMIATDVAARGLDVKD
IKCVINYDFPSSLEDYIHRIGRTGRAGATGTAFTFFTHANAKYTRQLIKILQQAGQIVPP
QLSALAGSTGPSTGGSNFRSRGRGGFGNRDQKSGSNVIPLGRRPW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagctactctaattacgactccagatacggtgactcaagctcctatcgccagcgtcgc
agtgacctagtgggtccacctcatatatattctcggcctatgcctggtggagctgcggct
agctacggtcgtggtgggccccttccttatggcggtcctcaagcaccgcctatggacgct
ggtgctagagggggtagtggtatgggtggatctggacctgttgccggcgggtccaatggg
tatccaccttttgaaggtggtttttcaagagggtctggtatgggccgggacagtggcttt
ggaggtgacagagtgactaatggtggtatgggagaccggcctgggcgatttggtgcgggg
tcaaacaacactggaagtaggagtggtgggagaggaggtagggattttgatggaggctac
agtggtggacgtggaggtggaaggtttagttcggatagaggccgtggtagtagtggtggg
agaggaggtaggcatgggagctcgcgagatgatctagacaaccttactcttccaaaggta
gactttggaaacctggtacccttcgagaagaatttttatgttgaacatcactctgtgagg
gcaatggctgaagaggatgttgctctttatcgtgcacggcgtgagattactgttgaaggc
catgatgtccctaggccaattcagatgttccatgaggccaactttcctgattattgcctc
gaggttatttcaagattaggatttgttgagccaacacctatccaatcacaaggatggcca
atggctttaaagggcagagatttaatagggattgctgaaactggttctgggaagactttg
gcatatctattgccggctttggtccatgtccgcgcacaacggttggcacatggtgatggc
ccaatcgtgctagtattagcacctacgagagaattggctgttcagattcaaaaagaagct
gtcaaatttggatcgcgtgccaacataagtagtacttgcatttatggtggtgccccaaaa
ggacctcaaatccgtgatcttaaaagaggagttgaaattgtgattgcaacccctggtcgg
ttaatagatatgctggaagctcaacatacaaacttgaaaagagtgacttatctcgtgctg
gacgaggctgatcgaatgctggatatggggtttgagcctcaaatcaggaaaataatatcc
cagattagaccagatagacaaaccttgtattggagtgcgacttggcccaaagaggttgaa
accctggctaggcagtttctacgcaatccctataaggtcatcattgggtctccagacttg
aaagcaaatcaatctataaggcaaatcgttgaagttgtcacagatttagagaagtataga
aggttgattgggcttttgaaagaaatgatggatggaagcagaatcctaatatttgtagaa
acaaagaaaggatgtgatcaagtgacaagacagttgagaatggatggatggccagcttta
tccatccatggcgataaaagccaggatgagagggattgggtcctggctgaattcaaaaat
ggcagaagtcccataatgattgctactgatgttgctgcacgtggtcttgatgttaaggac
ataaagtgtgttatcaactatgatttcccttcaagtcttgaggattatattcataggatt
ggcagaactgggcgtgcaggtgccaccggaactgcatttacatttttcacccatgcaaat
gccaagtatacccgacagcttattaagatccttcagcaggcagggcaaattgttccacct
caactttctgcattggcagggtctactggtcctagcactggagggagcaatttccggtct
agaggacgaggtggctttggaaaccgggaccagaagtctggatccaacgtaattcctctt
ggtagaaggccttggtag
DBGET
integrated database retrieval system
