Nicotiana tabacum (common tobacco): 107807714
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Entry
107807714 CDS
T04643
Name
(RefSeq) LOW QUALITY PROTEIN: cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107807714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107807714
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107807714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
RNA_helicase
AAA_16
AAA_28
AAA_17
AAA_33
nSTAND3
NPHP3_N
Bac_DnaA
AAA_18
IstB_IS21
Parvo_NS1
Rad17
AAA_3
Mg_chelatase
Viral_helicase1
ATPase_2
Cytidylate_kin2
NB-ARC
NACHT
TsaE
AAA_11
AAA_7
Motif
Other DBs
NCBI-GeneID:
107807714
NCBI-ProteinID:
XP_075093654
UniProt:
A0AC58T8X9
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All DBs
Position
2:complement(109688279..109690734)
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AA seq
660 aa
AA seq
DB search
MGRRSAGNKRRRFGGGGEKPVLQLQNPNPNPKPTEEEVTPPSKKPKIIDSSEQQLPLLES
EPSSLTDAISDNDVNNGPRFKDLGGMDAVLEELKMEVIVPLYHPQLTKHLGVKPMSGILF
HGPPGCGKTKLAHAIANETGVPFYKISATELVSGISGASEENIREMFSKAYRTAPSIVFI
DEIDSIASKRENLQREMERRIVTQLMTCMDESHRLVKPDDEKDGDGFNGGNAGYVLVIGA
TNRPDAIDPALRRPGRFDREIALGMPDENGRAQILSVEGAFDLMKIARSTPGFVGADLAA
LTNKAGNLAMRRIIDLRKVELTSEVLVDGKEAEEWWKKPWSPEEMAKLSITMADFEEAVK
LVQPSSRREGFSAIPNVKWEDVGGLDLLRHEFVRSVVNPIKRPEDYTGYGVHYDTGFLLY
GPPGCGKTLIAKAVANEAGANFIHIKGPEILNKYVGESELAIRTLFTRARTCAPCILFFD
EVDALTTKCGKEGGWVVERLLNQLLIELDGADERKGVSVIGATNRPEVMDPAIHRPGRLG
KKLYVPLPSPEERGLILKALSKRKPIDASVDLMKIGRDDGCNNLSGADLSALMNEAAMLA
LEDKLKASDTSDEKLWTIKESHFNRAMEKISSHFNRAMEKISPSVSDKQIEYYQLLSETL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggcggtcggcagggaacaaaaggcgaagatttggcggcggcggcgaaaagcct
gttctccaactccaaaaccctaatcccaatcccaaacccactgaagaagaagtaactcct
ccgagtaaaaagccgaagataatcgacagcagtgagcaacaattgccactccttgaatcg
gagccttcgtcattaactgatgcaattagtgataatgatgtgaataatgggccgaggttt
aaggatttaggaggaatggatgctgtattagaggaattaaaaatggaggtaattgttcca
ttgtaccatccacaattaactaagcatctaggagttaaaccaatgtcaggaatactcttt
catggcccacctggttgtggaaaaacaaagctggcccatgcaattgcaaacgagactggt
gttccattttacaaaatttctgctactgaattggtctctggaatttcaggtgcatcagaa
gaaaacataagggaaatgttctcgaaagcatacaggacagcaccttctattgtgtttatt
gatgaaattgattcaattgcttctaaacgagagaatttacagagagaaatggaacggcgc
attgtaacgcagctgatgacatgcatggatgaatcgcataggcttgtaaaacctgatgat
gaaaaagatggtgatggatttaatggcggtaatgctggttatgtgctggtaattggagcc
acgaatagacctgatgctattgacccggcactaaggaggcctggacgatttgaccgtgaa
atcgcattaggtatgccagatgaaaatgggagggcacagattctgtctgtggagggcgcg
tttgatctaatgaagatagctaggtcgaccccaggatttgttggagcagacttggctgct
ctaactaacaaggcgggtaatttggcgatgaggaggataatagacttgaggaaggttgag
ctaacaagtgaagtgttggtagatgggaaagaggctgaagaatggtggaaaaagccgtgg
tcacctgaagagatggcaaaactcagcattactatggctgattttgaggaagcagttaaa
ttggttcaaccctcttctagaagagaaggtttttccgccataccaaatgttaagtgggaa
gatgttggaggacttgatttgttgaggcatgaatttgttcgttccgttgttaatcctata
aagcgtcctgaagattatacgggttatggagtgcattacgacacaggatttttgctttat
ggtccaccaggatgtggtaaaacgttaatcgccaaggctgttgctaatgaagctggagca
aattttatacacattaagggtcctgaaattctgaacaagtatgttggtgaaagtgagtta
gctattcggacattgtttactcgtgcaagaacgtgcgccccctgtatactgttcttcgat
gaagtggatgcattgacaactaagtgtggtaaagaaggaggttgggttgtcgaaaggctt
ttgaatcagctactaatagaactagatggtgcagatgagagaaagggtgtttctgttatt
ggtgctacaaataggcctgaagttatggaccctgctattcatcgacctggaagattaggg
aaaaaactatatgtccctctacctagtccagaggagcgtggactaattttaaaagcgctt
tccaagagaaaacctatagatgctagtgtcgatttgatgaaaattggaagagatgatggt
tgtaataatttaagtggagctgatctatcagctttgatgaatgaagctgcaatgcttgca
cttgaagataaactgaaagcatcagatacaagtgatgaaaagttgtggactatcaaagag
tcacatttcaatcgggctatggagaaaatttcatcacatttcaatcgggctatggagaaa
atttctccatctgtctccgataagcaaatagaatattaccagcttttatcagaaacctta
tga
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