Nicotiana tabacum (common tobacco): 107807810
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Entry
107807810 CDS
T04643
Name
(RefSeq) soluble starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00500
Starch and sucrose metabolism
nta01100
Metabolic pathways
nta01110
Biosynthesis of secondary metabolites
Module
nta_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107807810
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nta01003
]
107807810
Enzymes [BR:
nta01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107807810
Glycosyltransferases [BR:
nta01003
]
Polysaccharide
Storage polysaccharide
107807810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Ig_PIFI
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
DUF3592
DUF3450
Motif
Other DBs
NCBI-GeneID:
107807810
NCBI-ProteinID:
XP_075090886
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All DBs
Position
17:105636146..105654406
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AA seq
1243 aa
AA seq
DB search
MDVPLPLQRPLSYSNSVSTERTHLNIKPFLGFVPHGTTCLSVQSSSWRNDGMVAGVSYPF
CANFSRRRQRKISTPRSQGSSPKGFVPRTPSGTSTQRRDQKSNGDKESQSTSSSKESEIS
NPKTMEAKVETSDDGTKQVGKDRKFQEEEDEFNGATKSVSLSPVRGSTQFVESGETGDDD
EGAVDLNKSNRTEESDFQIGSVRREQSEGDYSENTNASSKGSHALGTPLSEILQLDTYGG
YKVDELDEPQKLKENDAGDVEDERPLARELLEMTKPSDVEFTESNEIADVDSSSFLKADS
VEEDEPSAVGTLETEDISLKLRLEMEANLRRQAIERLAEENLLQGIRLFCFPEVVKPDED
VEIFLNRSLSTLNNEHDLLIMGAFNDWRWRSFTTTLTETRLNGDWWSCKIHVPKEAYKID
FVFFNGKDVYDNNDNNDFSITVEGGMQILDFENFLLEEKRREQEKLAKEQAERERLAEEQ
RRIEAEKAALEVDRSQAKEEVAKKREVLQALMAKASKTRDITWYIEPSVFKCEEKVKLYY
DKSSGPLSHAKDLWIHGGYNNWKDGLSVVEKLVKSERIDGDWWYTEVVIPDRALVLDWVF
ADGPPKHAIAYDNNHRQDFHAIVPKHIPEELYWVEEELQIFKALQEERRLREEAMRAKAE
KAARMKAETKERTMKSFLLSQKHIVYTEPLDVQAGSSVTVYYNPANTVLNGKPEIWFRCS
FNRWTHRLGPLPPQKMLPAENGTHVKATVKVPLDAHMMDFVFSEREDGGIFDNKSGMDYH
IPVFGGVAKEPPMHIVHISVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLK
MNQVKDFQFHKSYFWGGTEIKVWFGKVEGVSVYFLEPQNGLFWKGCVYGCNNDGERFGFF
CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLI
GKAMTYADKATTVSPTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPLNDKFIPISYTS
ENVVEGKTAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLL
GSAPDPRIQNDFVNLANQLHSTYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLT
QLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAAGVDYALNRA
LSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKLE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggatgttccattgccactgcaaagaccattgagttacagcaatagtgtctccactgaa
agaacccacctcaacatcaaaccttttcttggttttgtccctcatggaaccacatgtcta
tccgtacaatcttcttcatggaggaacgatggaatggttgctggagtttcatatccattt
tgtgcaaatttctccagaagaagacagagaaaaatttcaactcctaggagtcaaggctct
tcaccaaaggggtttgtgccaaggacgccttcagggacaagcacacaaagaagggatcag
aagagcaatggtgataaagaaagtcaaagtacttcatcatccaaagaatctgaaatttcc
aaccccaaaacgatggaagcaaaagttgaaactagtgatgatggcactaaacaagtggga
aaggaccgcaagtttcaggaggaggaagatgaattcaatggtgccactaaatcagtaagt
ctgtcacctgttcgtggatcaactcaattcgtcgaaagtggagaaactggcgatgatgac
gagggtgctgtagatttaaataaatcaaatagaacggaagagagtgattttcaaattggt
tctgtaagaagagaacaaagtgaaggtgattactccgaaaatactaatgccagtagcaag
ggcagccacgctttgggtacaccactttctgagatattgcagctggatacttatggaggt
tataaagttgatgagttggatgagccacaaaaactgaaagaaaatgatgctggggatgtt
gaagacgagagacccttagcaagagagctgttggaaatgactaagcctagtgatgtggaa
tttactgaaagcaatgagatcgctgacgtagacagtagtagtttcttaaaagcagattca
gttgaagaggatgagccatcagcagtaggaacattagagactgaagatatttctcttaaa
ttaagattggagatggaagcaaatctacgtaggcaggctatagaaaggcttgccgaggaa
aatttgttgcaaggaatcagattattttgtttcccagaggttgtaaaacccgatgaagat
gtcgagatattccttaaccggagtctttccactttgaataatgagcatgatctcttgatt
atgggagcttttaatgactggcgctggagatcttttactacaacactaactgagactcgt
ctcaatggagattggtggtcttgcaagatccacgtccccaaggaagcatacaagattgat
tttgtgttttttaatggaaaagatgtctacgacaacaatgataataatgatttcagtata
actgtggaaggtggtatgcaaattcttgattttgaaaatttcttgctcgaggagaaacgg
agagaacaggagaaacttgctaaagaacaagctgaaagagaaagactagcagaagaacaa
aggcgaatagaagcagagaaagctgcacttgaagttgatagatcacaggcaaaggaagag
gttgcaaagaaaagggaagtattgcaagcactgatggcaaaagcctcgaagactcgtgat
atcacctggtatatagaaccaagtgtatttaaatgtgaggagaaggtcaagttatactat
gacaaaagttcaggtcctctctcccatgctaaggacttgtggatccatggaggatataac
aactggaaggatggtttgtctgtcgttgaaaagcttgttaaatctgagagaatagatggt
gattggtggtatacagaggttgtcatccctgatcgggcacttgtcttggattgggttttt
gctgatggtccacccaagcatgccattgcatatgataacaatcatcgccaagacttccat
gccattgtccccaagcacattccggaggaattatattgggttgaggaagaacttcagatc
ttcaaggcacttcaggaggagagaaggcttagagaagaggctatgcgtgctaaggctgaa
aaagcagcacgtatgaaagctgaaacaaaggaaaggactatgaaatcatttttattgtct
cagaagcacatagtgtacactgagcctcttgatgtccaagctggaagcagcgtcacagtt
tactataatcccgccaatacagtacttaatggtaaacctgaaatttggttcagatgttca
ttcaatcgttggactcaccgcctgggtccattgccgcctcaaaaaatgttgcctgctgaa
aatggcacccatgtcaaagcaactgtgaaggttccattggatgcacatatgatggatttt
gtattctctgagagagaagatggtggaatttttgacaataaaagtggaatggactatcac
atacctgtgtttggaggagtcgcaaaagaacctccgatgcatatcgttcatatttctgtc
gaaatggcacctattgcaaaggtgggaggccttggtgatgttgttactagtctttcccgt
gcagttcaagatttaaaccataatgtggatatcatcttacctaagtatgactgtttgaag
atgaatcaggtgaaggactttcagtttcacaaaagctacttttggggtgggactgaaata
aaagtatggtttgggaaggtggaaggtgtctccgtctactttttggagcctcaaaacggg
ttattttggaaggggtgtgtatatggttgtaataatgatggtgaaagatttggtttcttt
tgtcacgcggctttggagtttcttctgcaaggtggatttcatccggatatcatccattgc
catgattggtctagtgctcctgttgcgtggctctttaaggaacaatatacacactatggt
ctaagcaagtctcgtattgtcttcacaatacacaatcttgaatttggtgcagatctcatt
gggaaagcaatgacttatgcagacaaagctacaacagtttcaccaacttactcaaaggag
gtgtctggaaaccctgtaattgcacctcacctttacaagttccatggtatagtgaacggg
attgacccagatatttgggacccgttgaacgataagttcattccgatttcatacacctca
gaaaacgttgttgaaggcaaaacagcagccaaggaagctttgcagcaaagacttggactg
aaacaggccgaccttcctttggtaggaataatcacccgcttaactcaccagaaaggaatc
cacctcatcaaacatgctatttggcgcaccctggaacggaatggacaggtggtcttgctt
ggttctgctcctgatcctaggatacaaaacgattttgttaatttggcaaatcaattgcac
tccacatataatgaccgtgcacggctctgtctaacatacgatgagccactttctcacctg
atatatgctggtgctgatttcattctagtcccttcaatatttgagccatgtggactaaca
caacttacggcgatgagatatggttcaattccagttgtgcgtaaaactggaggactttat
gatactgtatttgatgttgaccatgacaaagagagagcacaacagtgtggtcttgaacca
aatggattcagctttgatggagctgatgctgccggagttgattatgctctgaatagagcg
ctgtctgcttggtatgatggtcgggattggttcaactctttatgcaagcaggtcatggaa
caagattggtcttggaaccgacctgctcttgattatttggaactttaccatgctgctaga
aagttagaatag
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