Nicotiana tabacum (common tobacco): 107808013
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Entry
107808013 CDS
T04643
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107808013
Transcription machinery [BR:
nta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107808013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
Peptidase_S30
Motif
Other DBs
NCBI-GeneID:
107808013
NCBI-ProteinID:
XP_016487978
UniProt:
A0A1S4BGH9
LinkDB
All DBs
Position
Un
AA seq
572 aa
AA seq
DB search
MHIKFQVFLLHSQNLLAMGFRLYLKWGFSVQPPFSSNSSSWPSSHSLKGKEALYDPARSL
KPFINEDCEPSHSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNG
ITLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHT
CLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNAN
DIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSI
LEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVA
FEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAI
NQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVM
ELTPDKSIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLY
GVSKEWIRRIERRALSKLRSADCFQDLTHYSV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaattccaagtctttctcttgcattcacaaaaccttttggctatgggtttt
aggctgtacctcaaatggggtttctctgtccaaccccctttctcctccaactcatcatca
tggccttcttcacattctttgaaaggaaaggaggctttatacgatccagctcggtctctc
aaaccttttatcaatgaggactgtgaaccttcacatagtgatcctttcagagtgcggact
tgtttatctgacccccaactgtggactagtgatacatcagtaactacagaaataaagacg
cgaatcggcagaggatcccctaccaatatatatggagatattggcagtcctaagaatggg
ataacacttgatggggagaaaccaacatatttaaacacaaccagagctcttcattttagt
ttactgatgaaaaatcttgatctgctggaaaacatgtttgctgattcagaggtgtcaaga
ttagaaagagatattatggtgcagctagacaagcttggagctttagaattctttcatact
tgtctctcaaggacaaatcattgttctacttttcctgaagtgcttgacgtgccaagggag
cttattgaagaaattgaaaaagatggccttgttggaaatggtatagataaggtagtcgta
cgttctaaaaaaaagcaagagcggaagtcaagaagaaacagagcatccagaaatgctaat
gacattattacagtgcagccacataccaaaaacatccaggaggatttgcagcagccaaag
tttttttctggaaaaagaacacatacctctagaaataaaagacagaaaattgctaagaat
gaggcagaaatgtcaagaggtgttaagctggtagcagaattggaaagaatcaggtcaatc
cttgaagaagaaactggtcgagtagctagtttcagtagctgggcagaagctgctggagtt
gaacagaaggagttgcagcagcgcttgcattttggttggtattgcagggatgagcttctg
aaaagtacacgatccttagtcttatatctggcaagaaactacagggggcttggagtggca
tttgaagacttaattcaggctgggaacatgggtgtgctacaaggtgctgtaagatttgac
gacactaggggatacaaattctcaacttacgttcagtattggataagaaaatcattgtca
aaattggtggcccagcatgctagaggaatccgaattcccttcactatatgcaaagcaata
aatcaaatacataaagctcgtaaagctctcagtaggagccacggaaaatttccaggtgat
gatgaaattgccaagtacacgggtctatccacggctaggattgcaatggctagtaaatgc
ctgagagttgtgggttcaattgatcagaaagttggagattgcatcagtgcaaaagttatg
gaactcacaccagataaatcaattataagcccggaggaaactgtcattagggaagacata
atagacaacatgtatgctcttttggaaagcttggatccaaaagagcagcaagtagtatat
tttaggtttggtcttgaaaatcatcagcgcaaatccctcgaggagattggtaggctttat
ggagtaagtaaagagtggattaggagaatagaacgaagagctctctcaaaattaagaagc
gctgattgtttccaagatttaactcattactctgtatag
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