Nicotiana tabacum (common tobacco): 107808228
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Entry
107808228 CDS
T04643
Name
(RefSeq) AP-1 complex subunit gamma-2 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107808228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107808228
Membrane trafficking [BR:
nta04131
]
Endosome - Golgi transport
Others
AP-1 complex
107808228
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_GCN1
HEAT_2
PDS5
Motif
Other DBs
NCBI-GeneID:
107808228
NCBI-ProteinID:
XP_016488217
UniProt:
A0A1S4BH94
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All DBs
Position
12:90511210..90535655
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AA seq
879 aa
AA seq
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MNPFSSGTRLRDMIRAIRASKTAAEERAVVRKECAAIRASISENDPDFRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFVN
PVAALLKEKHHGVLITGVQLCADLCKVSTEALEYFRKKCTDGLVKVLKDVANSPYAPEYD
ISGITDPFLHIRLLKVLRVLGQGDADASDSMNDILAQVATKTESNKNAGNAILYECVETI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAIAVDSQAVQRHRATILECVKD
SDPSIRKRALDLVYLLINDSNVKPLTKELTEHLEVSDPEFKGDLTAKICSIVEKFSPEKI
WYIDQMLKVLSEAGNYVKDEVWHALIVVITNASDLHGYAVRSFYRAVQTAGEQETLVRVA
VWCIGEYGEMLVSNVRRLDIEEHLTVTESDAVDVVETSIKSHSCDLTTRAMCLIALLKLS
SRFPSCSQRINDIIGQYKGSFVLELQQRAIEFNSIIERHQNMRSSLAERMPVLDEAIFSG
RRAGSVPAAVSTSKGVSVNLPNGAAKPSIAPVADLLDLSLDDAPAPSSSGGEFLQDLLGV
NLTPVSLQSDTNQGQKSGTDALLDLLSIGTPPAQSSSSTAQVFSSNTDNKSPLDILDRLS
TPSAPSAQVSSTGGNSSMLDLLNGLPSSPPMSVTEGNGPGHSSVTAFESSSLKLTFNLSK
QPGNPQTTLIEGSFTNKSQDVFTDFIFQAAVPKFLQLQLDPASGNTLSASGNGSITQKLR
VTNSQHGKKSIVMRIRISYKVNNKDVLEEGQINNFPRDL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctcctccggcacgcgtctcagggacatgattagggctatccgtgcttcc
aaaactgcagcagaagagcgtgccgtagtaagaaaagagtgtgctgctattagagcttca
atcagtgaaaatgatccagactttagacatcgtaatcttgcaaaactcatgttcattcac
atgcttggttatccaacacattttggtcaaatggaatgcttgaagttaatcgcatctccg
ggatttccggagaaacgaataggatatcttggtctaatgttgctgcttgatgaaagacaa
gaagttctcatgttggttacaaattctataaaacaagatcttaatcacaccaaccaatat
attgttggacttgcactttgtgccttggggaacatttgttctgcagaaatggctcgtgat
ttagcacctgaagttgaaaggttgctgcagtttagagatcctaatattcgaaagaaggca
gcactttgctctataagaattataaagaaggtcccagatcttgccgaaaattttgtaaac
cctgtagctgccttgcttaaagagaagcaccatggagttctcatcactggtgtccagctt
tgtgcagatctatgtaaagttagtacagaggcccttgaatattttagaaagaaatgcaca
gatggtttagtgaaagttttaaaggatgttgccaacagcccgtatgcacctgagtatgac
atttctggcattacagacccttttcttcatataagattgctcaaggtcttgcgtgttttg
ggccaaggcgatgctgacgctagtgactccatgaatgacattcttgctcaggtggcaacg
aaaacggagtcgaacaaaaatgcaggcaacgctattctctatgaatgtgttgaaactatc
atgagcattgaagataatggtggtttacgtgtgcttgctattaatattttgggaagattt
ttgtccaaccgtgacaataatatcagatatgtggcgctgaacatgctgatgaaagctata
gctgtagatagtcaagcagtacagagacatagggcaacaattttggaatgcgtgaaggac
tctgatccatcaattcgtaaaagagcccttgatctagtgtatctattaataaacgacagc
aatgtgaagccattgaccaaggagttaactgaacatctggaagtaagtgatccagagttt
aagggagatctgactgccaaaatctgttccattgtggaaaagttctcccctgagaaaatt
tggtacattgatcagatgctcaaggtcctctccgaggctggaaattatgtgaaggacgag
gtgtggcatgctctgattgtggtgattacaaatgcttccgacctccatggatatgctgta
cgatctttttatagagccgtgcaaacagcaggggaacaggaaactcttgttcgagttgca
gtttggtgcattggagagtatggtgaaatgttagtcagtaatgtcagaaggcttgacata
gaagaacacctaactgtgacagagtcggatgctgtggatgtggtggagacgtccatcaaa
agccattcgtgtgatcttacaactcgggcaatgtgtctgattgctttgttaaagctgtca
agtcgctttccatcttgttcacagcggataaatgatatcattggtcagtacaaaggaagc
tttgtgcttgaactgcaacagagagctattgaatttaactcgattatcgagaggcatcag
aatatgaggtcttcactagcagagagaatgccagttctggatgaagcaattttcagcgga
aggagagctggttctgtgccggcagctgtgtcaacttcaaaaggagtatcagttaatctt
ccaaatggagctgccaaacccagtattgctcctgttgctgacttactcgatcttagttta
gatgatgctcctgcacctagctcttctggtggagagtttcttcaggatcttcttggtgtc
aatctgacgccagtgtctttgcaatcagatacaaatcagggccaaaagagtggcactgat
gctttactcgatcttttgtcgattggaactcctcctgctcaaagcagctcttctacagct
caggtgttttcctccaatacagacaataaaagtccattggatatattagatagattgtcc
acaccttcagctccttcagcgcaagtctcatctacaggtggaaattcttctatgttggat
ttattgaatgggcttccttccagtccaccaatgtctgttacagaaggcaatggtccggga
cattcatctgttactgcatttgagagcagctccttgaaattaacattcaatttgtcaaag
cagcctggaaacccacagacaacacttattgaaggtagttttacaaataagtcacaagat
gttttcactgacttcatcttccaggcagcagttccaaagttccttcaactgcaattggat
ccagctagcggtaataccctatctgcaagtggtaatggatcaatcacacaaaagttaaga
gtcacaaacagccaacatggcaagaaatccattgtcatgcgtatacggataagttataag
gtgaataacaaagatgtcttggaggaaggccaaatcaacaattttcctcgtgatttgtga
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