Nicotiana tabacum (common tobacco): 107808458
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Entry
107808458 CDS
T04643
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107808458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107808458
Enzymes [BR:
nta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
107808458
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Other 90S particles
107808458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
UBA_2
Motif
Other DBs
NCBI-GeneID:
107808458
NCBI-ProteinID:
XP_016488470
UniProt:
A0A1S4BHW6
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All DBs
Position
Un
AA seq
277 aa
AA seq
DB search
MVRAYKVKGEKRKKKGENYDKEEIEEALEEESAKRARTEHTEADTEAAERVVDLLAGIPV
VSTDRSTKPGIIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNNRNPSDYRPDIAHQAM
LSILDSRVNKAGRLKALYVKTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVGK
REKLLRVIKNPVSKYLPIDCRKIGFSHSSEKLVDIQEYVNGINKDMNLVFVVGAMAHGKI
DKDYVEDYLSISDYPFALHSICDHGYAVCSTQWIIGN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcgtacaaagttaaaggggaaaagaggaaaaagaaaggagagaattatgat
aaggaagaaatagaggaagctttggaagaggagtcagcaaaaagagcgagaacagaacac
accgaagcagacactgaggcagctgaacgagttgtagatttactggctggtattccggtt
gtttcaactgatcgaagcaccaaacctggtattattttcatcatcgaaagagcttccctg
gaaattgctaaaattggaaagacttaccaacttctgaactcagatgagcattccaacttt
ctgaagaagaacaatcgaaacccttctgattatcgacctgatattgctcatcaggcaatg
ctttcaattttagatagccgagtgaataaagctgggagattaaaagctttgtatgtgaag
accgagaaaggtgtcctatttgaagtaaaacctcatgttcgtatccctaggacgtttaaa
cgatttgctggcattatgttgcagctgctacaaaagctgagcataactgctgttggtaag
cgagagaaactgttacgtgttataaaaaaccctgtttcaaagtacctacccattgactgt
cggaagataggcttctctcatagttctgagaagctggtggatattcaggaatatgttaat
ggcatcaacaaggacatgaaccttgtttttgtggttggggcaatggcccacgggaaaatt
gataaagattatgtcgaagattatctatcgatttctgattatccatttgcgctccacagc
atttgtgatcatggatatgcagtatgcagcactcagtggataatcggaaactga
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