KEGG   Nicotiana tabacum (common tobacco): 107808699
Entry
107808699         CDS       T04643                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03083  Polycomb repressive complex
nta04120  Ubiquitin mediated proteolysis
nta04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107808699
   04120 Ubiquitin mediated proteolysis
    107808699
  09126 Chromosome
   03083 Polycomb repressive complex
    107808699
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107808699
   04121 Ubiquitin system [BR:nta04121]
    107808699
   03036 Chromosome and associated proteins [BR:nta03036]
    107808699
Membrane trafficking [BR:nta04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107808699
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107808699
   Cul7 complex
     107808699
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107808699
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107808699
SSDB
Motif
Pfam: Skp1 Skp1_POZ DarP BTB Phage_TAC_12
Other DBs
NCBI-GeneID: 107808699
NCBI-ProteinID: XP_016488724
UniProt: A0A1S4BIN0
LinkDB
Position
4:138994593..138995133
AA seq 165 aa
MAEASSSITEKFFLTLKSSDGDEFVLEESIAIQSITIKNMVEDGCSSSVIPLSKVDTETL
IKVIEYMKMHSSTSSNEEEIENFDKKFVSNSINTILNILEAANFLDINNLLELCAEAVAN
RIKNKTPEAVRKIFNITSDFTPEEEAEIRNETPWAFEGNLDHSLD
NT seq 498 nt   +upstreamnt  +downstreamnt
atggcagaggcatcatcatcgatcactgagaaattttttttgactctgaagtcctcagat
ggcgatgagtttgtgttggaagaatccatcgccattcagtctataacaatcaagaacatg
gtcgaggatggatgctcctccagcgtcatcccgctcagcaaagtcgacacagaaaccttg
atcaaggtcattgaatacatgaagatgcactcctcgacctcttccaacgaagaagaaatc
gagaacttcgacaagaaatttgtgagcaatagcataaataccattcttaatatcttagaa
gccgcgaattttcttgacatcaataatttgcttgagttgtgcgctgaggcggtggctaat
aggattaagaacaagacgcctgaagctgttcgaaagatattcaatatcactagtgatttc
accccagaggaagaggcagagattcggaatgagactccatgggccttcgaagggaatctt
gaccactcccttgactag

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