Nicotiana tabacum (common tobacco): 107808745
Help
Entry
107808745 CDS
T04643
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107808745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107808745
03036 Chromosome and associated proteins [BR:
nta03036
]
107808745
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107808745
Coactivators
SAGA/TFTC/STAGA complex
107808745
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107808745
STAGA complex
107808745
TFTC complex
107808745
SAGA complex
107808745
SLIK complex
107808745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
TAF4
CEP76_N
Motif
Other DBs
NCBI-GeneID:
107808745
NCBI-ProteinID:
XP_016488797
UniProt:
A0A1S4BIW5
LinkDB
All DBs
Position
12:125273112..125278037
Genome browser
AA seq
545 aa
AA seq
DB search
MSTVPKETIEVIAQSIGVSNLSPDVLPALSADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDAALSLRGVEPIYGLASGDPLRFRRAAGHKDLFYIEEKDVELKDVIEAPLPKAPLDTAI
VAHWLAIDGVQPAIPENPPPEAFAMPSDNRKTEYKEDGVPVDIKVPVKHVLSRELQLYYD
KITELTLNRSNPLLFKEALASLATDSGIHPLVPYFTYFVADEVARKLNNFPLLFSLMRLV
WSLLQNTQIHMEPYLHQLMPSILTCLVAKRLGNRISDNHWELRDFSAKLVALICKRHGHM
YHNLQPRVTRTLLHAFLDPTKALSQHYGAIQGLAALGPGVVRLLVLPNLEVYLQLLESEM
QLEKQKNEMKRLEAWRVYGALMCAAGLCIYERFKLLPASLSPSTRTFLKNKWKVSTTLSN
KRKASLDNMMTQPPPKKLMTDGPTGSMTTNSLPVSTQGPAGRYAATLGATETGLSSAPQG
LHNENMPRSSSRREMAGVQGQKTSATLDQAWKEDLDVAHLLPSLFECFGERMFPFTPSPE
LSFFL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagttccgaaagagacaatagaagtgatagcacaaagtataggtgtaagcaat
ttatctccagatgtcttgcctgctctctccgctgatgtcgaataccgtattcgggagatt
atgcaggaagctattaaatgtatgcgtcattcgaagagaacgaccttatctactgatgat
gtggatgctgcactcagcttgagaggcgtagagccaatatatggtttagcttcaggagat
ccgttaaggttcagaagagcagctggacacaaggatttgttctacattgaagagaaggat
gtagagttaaaagatgtgatcgaagctcctttgcctaaagcaccgttagacactgctatt
gttgcccattggttagctatagatggagtacagcctgctattcctgaaaaccctccgcct
gaagcctttgctatgccctctgataataggaagaccgagtataaggaggatggagttcct
gttgatattaaagtacctgttaagcatgttctatcccgtgagctccagctctattatgac
aaaattacagagcttactttgaatagatcgaatcctcttctctttaaagaagctctagca
agcttagcaacggactcagggattcatcctttagttccttactttacatattttgttgct
gatgaggttgctcggaaattgaacaattttcctctccttttctctttgatgcggctagtc
tggagccttctccagaatacacaaatacatatggaaccatatctgcaccagttgatgcct
tctatattgacatgccttgttgcaaaaaggctgggaaacagaatttctgacaatcattgg
gaacttagggacttctcagcaaagttggttgctttaatatgcaagagacatggtcatatg
taccacaatctccagccacgtgtcaccaggactttgttgcatgcttttctggatccaact
aaggcgctgtctcaacattatggagcaatacaagggctagcagctcttggacctggtgtg
gttcgcctacttgtgctgccaaatcttgaggtttatttgcaattgctagagtccgaaatg
cagcttgagaagcaaaaaaatgaaatgaagaggcttgaagcttggcgtgtatatggagcc
ttgatgtgtgctgctggtttatgtatctatgagcgcttcaagttgcttcctgcttcatta
tctccatctactcgcacattcctgaagaataaatggaaagtctcaactacattgtcaaac
aaacgcaaagcaagcctggataacatgatgacgcagcctccacccaagaaattaatgaca
gacggtccaacaggttcaatgacaacaaattctttgccagtaagcacgcaaggaccggct
ggtcgatacgctgcaaccctgggagccacggaaactggtctatcatcagcaccacaaggt
ttgcacaacgagaatatgccaagaagcagcagcagaagggagatggctggtgtgcaaggt
caaaaaacgtcggctactcttgatcaggcctggaaggaagatttggatgtcgcgcatttg
ttgccatctctgtttgaatgttttggtgaaaggatgtttccatttaccccttcaccggag
ttgtctttctttctgtga
DBGET
integrated database retrieval system
