Nicotiana tabacum (common tobacco): 107808825
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Entry
107808825 CDS
T04643
Name
(RefSeq) uncharacterized LOC107808825
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107808825
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107808825
Surveillance factors
Other surveillance factors
107808825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
107808825
NCBI-ProteinID:
XP_016488875
UniProt:
A0A1S4BJ15
LinkDB
All DBs
Position
Un
AA seq
1256 aa
AA seq
DB search
MEEEPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGSGVSYNPFRKGQSMDDVTETG
DTEPNNPKQGAPSADVTEEAADRLLKTSKGVEEANAYSFSYENGVKVKLDGGDNHEGQKE
KVSESIPADERLLTRKRTVKDCLKVISGSKSDTSEVSLPESGVTRATVFENIQQHVAFDV
SSKVPGDSNSRFAKSSSEIYWNNLLGRVTPPEELSLYYRDPQGEVQGPFLGADIISWFDQ
GFFGTDLPVRLEDAPEDSPFFELGDIMPHLKFEHEYVGNINLPQVEPSAVLEGKLDSGLH
CSASVSEMVGSAALDGLSWPTSDFDGHNGLGGHLNQSVPDHPARQFKPPYLQNEEFHDFV
AQDEEIVFPGRPGSSGNPIGKTSTGPTDPSNMHRAIPNAMTGGRVPNQEEEEPLHPLGLL
WSELEGTSGKSGPISDVPFSGGGQDQILNPVAARVAPFGAKTEPASTVETWTDAYRRNAL
LEPNLYQDATDASHLLHRDHELNRFELADKLFSQQLQQQHPNSLMSSHNSHLNEAMLEQG
ANYNSIHQPQMTSQTGQDLEHFMALQLQQKQQQQRQLQLQQQQLQQQQQFHQQQMLMKEQ
QSHARQLLLEQLLQSQICDSSLAQSRLGSIRHNSALEQVLIKQQILSELQQRSHLPPRHA
EPSIEHLIQAKFGQIPRQGHQNDLMELLSRAKHGQLHPVEHQILQQEQVHERLRQRLEME
EDRQIGSVWHVDETGQFLRNPAVARRANSGFGPLDIYQQQQIPLPEEHVSHLERNLSVQD
RLQRGLYDSGLLPLERTMSVPGGGPGVNLDAVNPLLRAQGLEMQDPNSRMQSAGHMPGFS
TGTHAQSPHHPLFSNQFHAPNADTIENHWPERNGQLPVDWMETRMQQLHLNGEMQRRDFD
VKRASEDQSMWMSAGASDDSSKRLLMELLQQKSGQQSTEKAEMTRGILFERGFHSGQFSG
TNASNCSFNPLLDQDTSLNQAFSVGSYGSNSGLPPQRDHVDEIASGLDVGEKLPYKSHSG
ALAEVEPVFSSINDASQVYLEARESIGGQAGVMTVEGEMPVNLLSRHSSLGTGGGNLDFY
NDKSDRGDSVAEEIPKERMMTVTSKRLDNILLKRPPVLRVSSTQESLSELTSDTLVKSKN
PSDAMASERDKREAGGNAANQVRDTVTSGKKDVRFRRTASCGDADVSETSFSDMLKSNAK
KPTAQEAHASEALDGTQCARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaacccccagttactcaagtaattgctattgaaccattagcttttgttgtt
cctgatgctgaggaggaggctgtcctcaatgacatatggaagggtaaaattactggtagt
ggtgtttcttacaatccttttagaaagggtcaatcaatggatgatgtcacagaaactggg
gatacagagcccaacaatccaaagcagggtgctccctctgctgatgtcactgaagaggca
gctgataggttactgaaaacttcaaaaggtgttgaagaagccaatgcctatagcttttct
tatgagaatggtgtcaaggtcaagttggatggtggagataatcatgaaggacagaaagag
aaagtttctgaatctattcctgcagatgaaagattgttgaccaggaagagaactgtcaaa
gactgcttgaaagtcattagtgggtctaaatctgatacttctgaggtcagcttaccagaa
tctggagtaaccagggccactgtctttgagaacatccaacaacatgttgcctttgatgtc
agttcaaaggttcctggtgattcaaattcccgatttgcaaagtcctcttcagaaatctat
tggaacaaccttctgggaagggttaccccacctgaggagttgagtttgtattatcgtgat
ccacagggcgaagtccaggggccatttcttggagctgacatcatctcatggtttgaccag
ggattttttggaactgacttgccagttcggttggaagatgcccctgaagattcacctttc
tttgaactgggtgacataatgccgcatttgaaatttgaacatgagtatgttggtaacatc
aatcttcctcaggtagaaccatctgctgtactagaggggaagctggactctggtttacat
tgctcagcttctgtttctgagatggttggttctgctgccctggatggcttgagctggccg
acatctgattttgatggccacaatggccttggtggacatcttaatcagtcagtacctgat
catccagctcgtcaatttaaaccgccttatttacaaaatgaagagtttcatgatttcgtt
gctcaagacgaagaaattgtgtttccaggaagacctggaagcagtggcaatcctattgga
aaaacttcaacgggacctactgatccttcaaatatgcaccgtgcaattccaaacgcaatg
accgggggccgagttccaaatcaggaagaggaagagccactgcacccacttggtttatta
tggtcagagcttgaaggcacttcaggaaagagtggtcctatctcagatgttccatttagt
ggaggtggccaggatcagattctaaaccctgttgctgcaagggttgcgccgtttggtgct
aagacggaaccagcctctactgtagagacatggactgatgcttatagaagaaatgctcta
ttagaacccaacttatatcaagatgctacagatgccagccacttgttgcacagggaccac
gaactgaaccggtttgagttggcagataagctgttctcccaacaacttcaacaacagcat
cctaatagtttgatgtcttctcataatagtcatttaaatgaagcaatgctggaacaaggg
gcaaattataattcaatacaccaaccgcagatgacgagtcagactggacaggacttggaa
cactttatggctcttcagctgcagcagaagcagcagcagcagagacagttacagcttcaa
caacaacaactgcaacaacagcaacagttccatcaacagcaaatgctaatgaaagaacaa
cagtcccatgctagacagctgcttcttgaacaattattgcagagtcaaatatgtgattca
agtcttgcacaatcacgtcttggttctattaggcataacagtgctctggagcaggtgttg
attaaacagcaaattctgagtgaactgcaacagcgttcacatctccctccaagacatgct
gaaccatctattgagcatctcattcaagcaaaatttggtcaaataccgcgtcaagggcat
caaaatgatttgatggagctcctatctcgggcaaagcatggacaactgcaccctgtggag
catcaaatccttcaacaggaacaagtgcatgagaggctaaggcaacgtttggaaatggag
gaagatagacagattggttctgtctggcatgtagatgaaactggtcagtttctccgaaat
ccagctgttgctcgtcgagccaactctggatttggcccattagatatttaccaacagcaa
cagataccccttcctgaagagcatgtcagtcatctggaaaggaatttgtcagtgcaggat
agacttcagcggggtctctatgactctggattactgcctttagaacgtacaatgtcagta
cctggtggtggtcctggtgttaatttggacgctgtaaatcctctattgcgtgcacaaggt
ttagaaatgcaagatccaaattcaagaatgcaatcagctggtcatatgcctgggttctcg
actggaacccacgcgcaatctcctcaccatcctttgttttccaatcaatttcatgctccg
aatgcagatacaattgaaaatcattggcctgaaagaaatggtcagttaccagttgattgg
atggaaactcggatgcagcaactgcatcttaatggtgagatgcaaagaagggattttgat
gtcaaaagggcttctgaagatcaaagtatgtggatgtcagctggtgctagcgatgacagt
tcaaagcgattacttatggagctgctccagcaaaaatctggccagcagtcaactgagaaa
gcagaaatgaccagggggattttgtttgagaggggctttcactctggtcagttttctggg
acaaatgcttcaaactgttcgttcaaccctcttttggaccaggatacgagtctaaaccaa
gcctttagtgttggatcatatggttctaattcaggtttgccaccacagagagatcatgta
gatgagattgccagtggtcttgatgttggtgagaaattgccctacaaatctcattctgga
gctttagctgaagttgaacctgtcttttccagcatcaatgatgcctctcaggtgtatctt
gaagctcgagaaagtatcggtgggcaagctggtgtgatgactgtagagggggaaatgcca
gttaacttgcttagcaggcacagttcacttgggactggaggtggaaatcttgacttctac
aatgacaagagtgatagaggggattcggttgcggaggaaattccgaaggaacggatgatg
actgtgacatcaaaaaggctggataatatcttgctgaagcgtccacctgtcttacgagtt
tcttcgacacaggagagtctatctgagctaacttctgatacccttgtgaaaagcaaaaat
ccttcagatgccatggcttctgaaagggacaagagggaagcgggaggtaatgcagcaaat
caagtccgtgacaccgtgacatctggaaagaaagatgtgcgcttccgacgtactgcatct
tgtggtgatgctgatgtttcagagacatcattcagtgacatgcttaagagtaacgcaaag
aagccaacagctcaggaggcacatgcatcagaggcattggatggaacacaatgtgcccgt
agtggtaagaagaaaggaaagaaaggaaggcagattgatcctgctcttcttggattcaag
gttacaagcaatcgcatcatgatgggtgagatacaaaggatagaagattag
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