Nicotiana tabacum (common tobacco): 107809218
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Entry
107809218 CDS
T04643
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107809218
04121 Ubiquitin system [BR:
nta04121
]
107809218
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Other 90S particles
107809218
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107809218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
eIF2A
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
PROPPIN
VID27
Motif
Other DBs
NCBI-GeneID:
107809218
NCBI-ProteinID:
XP_016489297
UniProt:
A0A1S4BKD9
LinkDB
All DBs
Position
Un
AA seq
452 aa
AA seq
DB search
MRVKAITRSTDEFTRERSQDLQRVFRNFDPNLRPQEKAVEYVRALNAAKLEKIFARPFVG
AMDGHIDAVSCMAKNPNHLKGVFSGSMDGDVRLWDLATRRTVCQFPGHQGAVRGLTVSTD
GRILVSCGTDCTLRLWKVPGDTLMESDDGSGNSSQPLAVYVWKNAFWGVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNSFEWGNDTVTSVRFNPGEPNLLATSASDRSINIYDLRMSTPAR
KVIMRTKTNSIAWNPMEPMNFTAANDDGKCYSYDVRKLNEAKCVHKDHVSSVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYIISGSDDTNLRLWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLAEVKRIVRHRHLPKPIYKATKQVREMTES
ERRRAERRKAHSAPGSIQNEPLRTSRIIKEIE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgaaagcgataactcggtctacggatgaatttactcgtgaacgcagtcaggac
ctccagagagtttttcgtaacttcgatcccaaccttcgacctcaagagaaggcagtggaa
tatgttcgcgccctgaatgcagcaaaactagagaagatatttgcaaggccatttgttgga
gcgatggatgggcacattgatgctgtctcttgcatggcaaagaatcctaatcacttgaaa
ggagtattttctggctctatggatggtgatgttcgcctatgggatttggctaccaggcgg
acagtatgtcagtttcctggtcaccaaggtgcagtacgtggtttgacagtgtctacggat
ggccgtattcttgtatcatgtggaactgattgcactcttaggctctggaaagttcctggt
gatactctaatggagtcagatgatgggtctggtaactcatcccagccattggctgtgtat
gtttggaagaatgcattctggggtgttgaccaccagtgggatggtgatctttttgctact
gctggtgctcaagttgacatttggaaccataacaggtctcagccggttaatagttttgaa
tgggggaatgacacagttacttctgttcggtttaatccaggagaacctaatcttttggca
acatcagcaagtgatcgtagcataaatatatatgatttacggatgtctacaccagctaga
aaggttattatgaggacaaaaactaattctatagcttggaatcccatggagccaatgaat
ttcactgctgctaatgacgatggcaagtgctacagttatgatgttagaaagttaaatgaa
gccaaatgtgtgcataaagatcatgtctcctcagtgatggatatagactattcaccaaca
ggtcgagaatttgttactggatcttatgatagaacagtgagaattttccaatataatggt
ggtcacagcagggaaatctatcacactaagaggatgcagagggtattctgtgtcaagttc
agttgcgatgcaagttatattatctcaggaagtgatgataccaaccttcgtctatggaaa
gcaaaagcatctgagcaattgggagttgttttgccaagagagcggaaaaaacatgaatat
ttggaggctgtcaagaatcgttacaagcatcttgctgaagtcaagcgcatagtcagacac
aggcacttgccaaaaccaatatacaaggcaacaaagcaagtacgggagatgactgaatct
gagaggcggagagccgagaggaggaaagctcacagtgccccaggaagcattcagaatgag
ccattgcgaacgagtagaattatcaaagaaattgagtga
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