Nicotiana tabacum (common tobacco): 107809288
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Entry
107809288 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107809288 isoform X2
KO
K10891
fanconi anemia group D2 protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107809288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107809288
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
107809288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FANCI_S1
FrvR_4th
Motif
Other DBs
NCBI-GeneID:
107809288
NCBI-ProteinID:
XP_016489377
UniProt:
A0A1S4BKL8
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All DBs
Position
19:complement(113717229..113735938)
Genome browser
AA seq
1501 aa
AA seq
DB search
MVLLQNNQTASRKRPAVKSKTGFVPPFAPPAKIPKSAEENVPQIASESEAPKLGKSQTVS
STEKMISVLADAGCTLINPSGPPCLPSDLHKLRNSLSRLFSSDSSLKSEFVQGFSSYINS
PGNLRRIISPSRRDGLGSVRSDSLTRVLLLVPSIQSDIQNLLLEKLPEYFDVDPGGNVGG
RSSSLCLEEDIARLILNQFRWLDFLVDSEIFTEKLFQVLSICPVHLKKEIIGSLPEIIGE
KNNKTVVDSLQEMLQEDSSIIVPMLDCFSNLHLDDMLQEQVITVALSCIRTIDVEHMPYL
LRFLLLLATPANTRRIISHIRQQLKLVGASNVWTTQQSKMKGKSIVNNAEASILDALRTS
LRFNKVICQETLNELKSLENVQNHKVIDIWLLMLIYMNSEPLQKSVEKLLKKKILEGCIV
ETMFDQCVSGNKDLAQDYLPTLLSITEYLLACKEAKAREFGIHMYTYLFKELVDSYSRQE
VLGALITHVGSGISHEVSSALDVLVLLASKYSQELIPLSSHITGILDYLETFSVENLHKV
YEAFSLLAFSAQVSTASFGSPISNELLVIVRKQLSSPDLIYKKMGLIGTLKIVSYLGDAK
ATKQLSSSQKSNYEEALELLETSMNSCKQLPLPLVMFYDELALTLKKKALHPAIVEWTSK
HVGDFESKFLCDLDGGELMVKELYCGLEGDLWMNLDGDISPICLNILPLVSSSLRAASSL
QILPANFVLLSSTERLANQGSLAGIDALLGCPIHLPSSKFFSQPLWGSLSGKQKQIIILS
LYYAANWLRELLNAFCTQAVNECDAFSQATREEITLKLFKRLRNLVFLESLLNSSLRQCS
FSLPELQPHLESLSLNQLDHNRVQEIKNEHGNGNGGLSQKKKKEKKTSQAPLTDGKLRQP
TIMDVLRKSGAVPSQEPSVSPSGTCSKGSVPESSGNQPRNSNVLANIDVSTTVEHVEAQR
YKFRPLLLECFAILAFQKTQDSCCADPASELPLCLYILRDLNRKLDYFSPRRHILVRRMS
VPPAFGEMKVIEFISKIQPLFPSLRRHLDSAVSGVGADTEICPDHWKTHSAFAGNPDIPN
ITIIRPSVSRFVIKETLQCFGKMLNIPDVQRDKSVLSDLLEAFQPISMTDCFFQGMQLIP
SPGDIGYLFAGAYSFVGTIFDSARAVSFALASDILLSLESVLSSIRTILDNDLDDIGKDI
RTGFSKELLSFLSKKLGTFAYTLLMQKCDGVNDIEDGQKVKAEVIQKLLRIYLENCESTS
DSLSELACSVLPQVSSRKSAVEDGSCFPTLCPATFCIWYRVMHEENLAMINRLVKEISLL
EKARGGVEMEDVKCLLKKLQQSVNVVVSLVNMCKTHDKVNVRAIAVKFGGKFVDSFLKAF
DFLQGQFELQREHIIQMVRELQMATRTIQTLCSEAKGMKQTTITSKIPITKRSMERFLFR
VKELLHSTSSGCTFWMGNLKHKNLMGDVVSSQAYIDDQNDNMDNVSMEDMVIDEPTDIAG
E
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggttcttctccagaacaaccaaaccgcttctcgtaaacgtccggcggtgaaatccaaa
accggatttgttcctccttttgctccgcccgccaaaatccccaaatctgctgaggaaaat
gttccacaaatagcttcggaatcggaagcgccaaagttagggaaatcacaaaccgtgagt
tcgactgagaaaatgatatcagttctagcggatgcaggctgcacactgatcaacccgtcg
ggtccgccatgtctaccgtccgacctacataagcttcggaacagtctcagccgtctcttc
tcatccgattcctctctaaagtctgagttcgttcaaggcttctcgtcttacattaactct
cccggtaatcttcgccgcattatatcaccttcaagacgtgatggacttggatcagtacga
agcgacagtttgacaagagtactgctactggttccttccatccagtcagacattcaaaac
ttgctgcttgaaaagcttcctgagtattttgatgtggaccctggtggaaatgttggaggg
agatcatcctctttatgtcttgaagaagacatagcaaggctgattctgaaccaattccgg
tggcttgacttccttgtagactcagaaatatttactgaaaaactgtttcaagtattatct
atttgcccggttcacttgaagaaggagataattgggtcattgcctgagattattggggag
aaaaacaacaaaactgtcgtagattcgcttcaggagatgcttcaagaggattcttccatt
attgttcccatgctcgattgtttctctaacctccatttggatgatatgttgcaagaacag
gtcattacagtggcgttatcttgtatccgaacaattgatgtggagcatatgccctaccta
ttgagattcttactgcttttggctacgccagccaatactcgtaggattatttcacacatc
cgacaacagctcaaacttgttggagcatcgaatgtttggaccacacagcagagtaagatg
aagggaaagtcaatcgtcaacaatgcagaagcttcaatacttgatgccttgcggacaagc
cttcgatttaataaagtaatttgccaagagacattgaatgaactgaaaagccttgagaat
gttcagaatcataaggtgatagacatatggttgcttatgcttatatacatgaacagcgag
cctttacaaaagagtgttgagaagttactgaagaagaaaattcttgagggctgtatagtg
gaaacaatgtttgatcaatgtgtttctggaaataaggatttggctcaggattatcttcct
accctcctttccataactgagtacttactggcttgcaaagaagccaaagcccgggaattc
ggcattcacatgtacacatatctattcaaagagcttgtggatagttattcaagacaagaa
gtccttggagcattaattactcatgtgggctctgggataagtcatgaagtgagttctgct
ttggatgtgttggtcctcctagcctcaaagtactcacaggagttgattccactatcttct
catataactggtatcctagattacttggagacatttagtgttgaaaacctgcataaggtg
tatgaagctttcagtcttctggcattttctgctcaagtaagtacagcgtcctttggatct
cctatttcgaatgagctactagtgattgtgagaaagcagctgagtagtcctgatctcatt
tataagaagatgggcttaattggcactctcaagatagtctcctaccttggggatgcaaaa
gctacaaagcaactttcatcatctcagaaatcaaattacgaggaagctttggagcttttg
gaaacatcaatgaactcttgcaagcagcttccacttccattagttatgttctatgatgaa
ctggctttaacattgaagaaaaaggcacttcatccagccatagtagaatggacaagcaaa
catgttggggacttcgaatcaaagtttttgtgtgacctcgacggtggggagcttatggtc
aaagagttatattgtggtttggaaggggatttatggatgaacctcgatggagacatatct
cctatatgtctgaatatcttgccacttgtatcctcttcattgcgggctgcttcatcactg
caaattcttcctgcaaactttgttttgctgtcttcaactgagaggttggcaaatcaagga
tctcttgcaggaattgatgcacttcttggctgtcctatacaccttccttcctctaagttc
ttctctcaaccactttggggctctttaagtggaaagcaaaagcaaatcattatcttgtca
ttgtactatgctgccaattggctgcgggaactgctcaatgccttttgtactcaagctgtc
aatgaatgtgatgcattcagtcaagcaacaagagaggagataactcttaaactatttaag
cggttgaggaacctcgtattcctggagagcttactaaacagttccctcagacagtgctcc
ttttctttacctgaactccaacctcatctggagtccttgtcactgaaccagcttgatcat
aatagagttcaggagattaagaatgagcatggtaatgggaatggtggtttatcacaaaag
aagaagaaagagaaaaagaccagccaagcaccacttactgatggaaaacttaggcagcca
accatcatggatgttctaaggaaatcaggtgcagttccaagccaagaaccaagcgtgagt
ccttctggaacgtgttctaaaggtagcgtacctgagtcatcagggaatcaaccacgtaat
tctaatgtactagcaaatatagatgtttctaccactgtggagcatgtggaagcacaaaga
tacaaattcaggcctcttttgctggaatgctttgccatcttagcttttcagaagactcag
gattcctgctgtgcagatcccgcttctgagttgcccctttgtctatatattctgcgggat
ctaaacagaaagctggactacttcagtccacgaaggcatatattggttaggcgcatgagt
gttcctcctgcatttggtgagatgaaagtaatagagttcataagcaaaattcagccacta
tttccttctcttagaaggcacttggattctgcagtatctggtgttggagctgatacagag
atatgcccagatcattggaaaactcattctgcctttgctggaaatcctgatatacccaat
attacaatcattagaccatcagtttcgagatttgtcataaaagagacacttcaatgcttt
ggcaagatgctaaacattccggatgttcagagagacaagtcagtactttcggatcttctg
gaggcattccagccaatcagcatgacagactgctttttccaaggcatgcaattgattccg
tcaccaggagacataggttatttatttgctggtgcatattcattcgtggggactatcttt
gattcagcacgtgctgtctcatttgctttggcatccgacatattgttaagcttagaatca
gtactttcctctatccgaactatactagataacgatctcgatgatattggaaaagatatt
cgcacaggtttttcgaaagagctactttcttttctgtcaaagaagctgggaacttttgct
tacacacttttgatgcaaaagtgtgatggcgttaatgacattgaggatggtcagaaagtc
aaagcagaggtcattcaaaagcttttgcgaatttacttggaaaattgcgagtccacttcc
gattccctaagtgaacttgcatgctctgttttgccccaggtttcatcacgcaaatctgca
gtggaagatggctcttgttttcctactctatgtcctgcaacattttgcatttggtaccgg
gtaatgcatgaagagaaccttgctatgattaatcgcttggtcaaggaaatttcactgctg
gagaaagccaggggtggtgttgagatggaagatgtcaaatgccttctgaagaaactacaa
caatctgttaatgtggttgtatctttagtcaacatgtgcaagactcacgataaggtcaac
gtccgtgcaattgctgtcaagtttggtgggaagtttgttgactctttcctcaaagctttt
gatttcttacaggggcaatttgaattgcagcgcgagcatataattcagatggttagagag
cttcagatggcaacgagaactatacagacgctgtgttcagaagcaaagggcatgaaacaa
acaacaataaccagcaaaatcccaatcaccaagagatctatggagcggttcttgtttcgt
gtcaaggaacttcttcactcaacgtcaagtggatgcactttttggatgggcaatctaaag
cataaaaatttgatgggggatgtagtaagctcccaagcatatatagatgatcaaaatgac
aatatggacaatgtttctatggaagatatggttatagatgaacccacagatattgctggt
gaatga
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integrated database retrieval system
