Nicotiana tabacum (common tobacco): 107809361
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Entry
107809361 CDS
T04643
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107809361
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107809361
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107809361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
AAA_16
HlyD_2
Motif
Other DBs
NCBI-GeneID:
107809361
NCBI-ProteinID:
XP_016489453
UniProt:
A0A1S4BKN4
LinkDB
All DBs
Position
Un
AA seq
1156 aa
AA seq
DB search
MSTLPILFFPWPSPSPLNSITSLSPFLPLLQIQTPGFCSVNSIHTPYSSKSRIFYKFPRS
VFPTESQDEYEEEDDDDDDEEAAEDYDNVVSAEVSDGGEESDDELESSLSEVLNFDETRK
QRVEKLRNEVREFGDEIIDANELASIYSFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTL
IAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCETFGESNVGLLTGDSAVNRDAQVLIM
TTEILRNMLYQSIGVASSDGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLIC
LSATVANPDELAGWIGQIHGRTELVTSSKRPVPLTWHFGTKTALVPLLDDKGTRMNRKLS
LNYLQYDESASELYKEEGSKRRKSRKCENDVRPLSKNDINNIRRSQVPQIIDTLWHLKAR
DMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVTAVKGLR
RGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGR
VQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASYGM
VLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQSFGNYVGSNVMFAAKEELARIE
KEIETLTSEISEEAIDRKSQKLLAQSAYQEIAGLQEELRAEKRLRTELRRKMELERVFSL
KPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDTLNIEKLKSMVRDYDAFALKTV
VENFEVGDSGGEDAKPSYHVALGSDNSWYLFTEKWIRMVYRTGFPNVALALGDALPREIM
TELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVPVLSSLSEEDEVLQLSKAYNDA
VECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTEEKIRRLKVRSKRLIGRIEQIEP
TGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWLATVLRNKLLLDLKPAQ
LAAVCGSLVSEGIRLRPWKNNSFVYEPSTAVLNVIDLLEETKSSILELQEKHGVQIPCCL
DSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQSNAK
GASNIMDRPPISELAG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagcacactccctatcctcttcttcccttggccttcaccttctcctttaaactccata
accagcctctctccatttcttccacttctccaaatccaaaccccagggttctgctccgtt
aactcgattcacactccgtacagttctaaatctagaatcttctacaaatttccgaggtcc
gtttttccaacagagtctcaagacgaatacgaagaagaggatgatgatgatgatgacgaa
gaagcggcggaagattacgataacgtcgtttcggctgaggtatccgacggaggcgaagag
agtgatgatgaacttgaaagttcccttagtgaagtgttgaacttcgacgaaacgagaaag
cagagggtcgagaagcttcggaatgaagttagagagttcggtgatgaaattattgatgct
aatgaacttgcttctatttactcttttcgaattgacaaatttcagcgattggccattcaa
gcttttttgagaggttcatcagttgtggtatctgcgcctacaagtagcggcaaaactttg
attgctgaagctgccgctgttgctacagtggcaaaaggaaggagactattctatactact
cctcttaaggcgttatccaatcagaaatttcgagaattttgtgaaacgtttggtgaaagt
aatgtggggctcctcactggagattcagctgttaatagagatgctcaggttttaattatg
acaactgagattttgcgcaatatgctataccagagcataggggttgcttcctcagatggt
ggtcttcttcatgttgatgtaattgttttggatgaagtacactatttaagtgacatatct
cggggtacagtttgggaagaaatagttatatattgcccaaaggaagttcaacttatatgt
ctttcggcgactgtagctaatccagatgagttggctggatggataggtcagattcatggt
agaacagagttggtaacatcatccaagcgtccagttccattgacttggcacttcggcaca
aagacagctttagtacctcttcttgatgacaaaggtacacgcatgaataggaagctgtca
ctcaactatttacagtatgatgaatccgccagtgagctatacaaggaagaaggatctaaa
agaagaaaatcaagaaaatgcgaaaatgatgttcgtccgctttcaaagaatgatataaat
aatattcgccgctcacaggtacctcaaattatagacacgttgtggcacctaaaggcgagg
gatatgcttccagcagtttggttcatttttagcaggaaaggatgtgatgcagctgttcaa
tatcttgaagactgcaggttactggatgagtgtgaaacgagtgaagttgagctggcactc
aagaggttccgtattcaataccctgatgctgtgcgtgtgactgcagtgaaaggcctccgc
cgaggagtggctgcacatcatgctggctgtctccccctttggaaatcattcattgaagaa
ttatttcagcgaggtttagttaaggttgtctttgctactgaaacacttgctgctggcatc
aatatgcctgctagaacagctgtcatttcatctctcagcaaaaggggtgatagtggacgt
gtccagttaagctcaaatgagttattccaaatggctgggcgtgctggtcgtagaggtatt
gatgaaaagggtcatgtggttcttgttcagactccgtatgaagggcctgaagagtgctgc
aaagttcttttttctgggcttcagcctcttgtttcacaatttactgcctcgtatgggatg
gtgcttaatcttcttgcgggggccaaagttacccgtagatcaagtgagttagatgagata
aaagtctcacgagcagggcggactttggaagaggcaaggaagttaattgagcagagtttt
gggaattacgtgggaagcaatgtcatgtttgccgcaaaagaggagcttgccagaatagaa
aaggaaatagaaacacttacttcagaaattagcgaggaagcgattgatagaaagagccag
aagctcttagcgcagtcagcatatcaggagattgctggactccaggaagaattaagagcc
gaaaagcgtcttcgaacagaactgcgaagaaaaatggagctggaaagagtgttttcgttg
aaaccattactgaaggagctagaagatggacaccttccattcatgtctttgcactacagc
gacagtgacggagtacaacatttagttgctgctgtttatctggggaaggttgatactttg
aatattgaaaagcttaaaagtatggtgcgtgactatgatgcctttgcattaaagacagta
gtggaaaattttgaagttggtgatagtggaggagaagatgctaaaccgtcttatcacgtg
gctcttggttcagataactcttggtatcttttcacagagaagtggattagaatggtttac
agaacaggctttccaaatgttgccttagctcttggtgatgctttgcctcgtgaaattatg
actgagcttcttgataaggcagagatgcagtggcagaagttagctgtgtctgaacttgga
ggtctatggtgtttggaaggttccttggagacatggtcttggagtttaaatgtgccagtc
ttgagcagtctatctgaagaggatgaggtcttgcaattgtctaaagcatacaatgatgca
gtagaatgttacaagaaccaacgtaataaggtctcccgtttgaagaaaaggatagctcgt
acagagggctttaaagagtataagaagataatagattcagctaagttcactgaggagaag
attcggcggttgaaggttaggtcaaagcgtttgattggtcgtatagagcagattgagccg
actggttggaaggaatttctgcaggtcagcaatgttatacatgaaagtagagcattggat
atcaatacacatgtcattttccccctgggtgaaactgcagctgcaattagaggagaaaat
gaactttggcttgcgacggttcttcgaaataaattgttgctggacctaaaacctgcacag
cttgctgcagtctgtggaagtctagtttctgaaggaattagacttcggccctggaaaaac
aacagtttcgtttacgaaccctccaccgctgtcttgaatgtcattgacttattggaagaa
acaaaaagctcaattctagagcttcaggaaaagcatggagtacaaattccttgctgcttg
gatagccaattctctggcatggttgaagcctgggcttctggtcttacttggaaagagatt
atgatggactgtgcaatggatgaaggagatttggctcgccttctacgaagaacaattgat
ttattagctcagattcctaaattgcctgatatagatccactgctgcaaagcaatgccaag
ggtgcatctaacataatggaccgcccaccaataagtgaattagctggatga
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integrated database retrieval system
