Nicotiana tabacum (common tobacco): 107809717
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Entry
107809717 CDS
T04643
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107809717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107809717
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107809717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107809717
NCBI-ProteinID:
XP_016489869
UniProt:
A0A1S4BLZ9
LinkDB
All DBs
Position
Un
AA seq
1155 aa
AA seq
DB search
MDSRAASFPRRRTRQQWDKYFVEVIEKKRLSQSGNPPQSSSTCSVNIGDDVTASGDMRES
SSATGKLTKENTSCGVDNRKIGKWSEGESMVRSLDKGKKRMDNGNRKLSPGTCESMTKQI
FVQEISDDDVDEEEEEEDSDPVVVITGESAAASALNTGSGSGSWSNCVGLRSPIVATADE
VVSSTSSMCRTRGPSELHKSEEPTDFEESEDDCVKSQESSDDTTESSESESEASSDEDND
DPEDKDYRVNEPSSSSESDDNIDDVSCHIELQDNEEGKGSNIRIGLDDDIDGRKESEDDD
PVEQQENGEGKGESNEGLIPQLVVEGEKHRGRAYLLRPRSLSKSKKRKLNHGNCSSPILL
SDDEESESPFEEGTDADDSTRDAAQKDKVDDLVKKVAEKEKADDSVKNAAQKDRKTRKKC
ILKDLDFVKFVVDSIINVDDHDKLASPEGKEQFPVKETLPLIFRFEDEDPLLQEKEEWEK
EIDNLFAEMDMGILESCIGFTNPSLGEKVSGCQMGSHHLILDEQIGLICKVCSHVHLESK
YIYPAFAERTRGRHERTYFGESSPFFDVDGFRFDDPSAVHDSAIYVEGTVWDLVPLHAKA
TMYPHQREGFEFMWKNIAGDIYLEKLSEPLSASRGGCIISHPPGTGKTRLTIVFLQAFLK
QFPKCRPVIIAPPKLLSNWEVEFQKWEADIPFHNLNNNDFSCQEDEVTVGLYHCLSRAGR
KNKHHIRMVKLKSWAKSKSVLGISYDLFEKLTGEYGDGYAKEIREILLTLPGLVVLEEGH
TPRNEQSLLYKAMTKVETQRRILLSGTVFQNNFKELYNTLRVVSPKFAAESEQKWASLSN
SIDTNSRALEELRDMIAPLIHICSENVKMKSLPGIRDTLVYLKPTDLQKKLLNMIPEYPG
SFDFRNMVSLISVHPSLVANKKVFSDLESQLNERECRLDPNTGVKTKFVVELIRLCDGMR
ERVIVFSQLLDPLRLIKEQLNSLFHWTLGREILYMDGELDVKQRQKSISSLNDPKSDAKV
LLASITACSEGINLIGASRVVLLDVHWNPSVEQQAVSRAYRNGQTKFVHVYCPVASKWEV
NKIEQQTRKKYHSGVLLSRNEVNTCKTNPSCSVLEDNILESMVQNESLRHIFEELPYEPR
AYGFSSCNQPSKASI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagggcagcctcttttccaaggaggaggactagacaacaatgggataaatat
ttcgtcgaggtaattgagaagaagaggttgagtcaaagtggtaatcctcctcagtcttct
agtacttgttctgtgaatattggagatgatgttacagcttctggtgatatgagggaatca
tctagtgcaacaggaaaactgactaaagaaaacacaagttgtggagttgacaacagaaaa
attggaaaatggtcagaaggtgaaagtatggtaagaagtttggacaaaggtaaaaaaagg
atggacaatgggaatagaaagctcagtccaggaacttgtgagtccatgacgaaacagatt
ttcgtccaggaaatatctgatgatgatgttgatgaggaggaggaggaggaggacagtgat
cctgttgttgttatcactggggagtctgctgcggcgtctgctttaaatactggatcaggt
tcaggatcttggtccaattgtgttgggttaaggagtcctattgtcgctacagcagatgag
gttgtttcatctacctcaagtatgtgtaggacacggggccctagtgagttgcataaatca
gaggagccaactgattttgaggaatcagaggacgattgtgtaaaatcacaagagtctagt
gatgatacaacagaatcttctgagtcagagtctgaagcttctagcgatgaggataatgat
gaccccgaagataaggattatcgggtgaatgagccatcaagttctagcgaatcagatgac
aacattgatgatgtgagttgtcatatagagcttcaagacaatgaagaaggaaaaggatct
aatataagaattggtttggatgatgacattgatggaagaaaggaatcagaagatgatgat
cctgtagagcaacaagaaaatggagaaggaaaaggggagtcaaatgaggggctaatacct
cagcttgttgttgagggtgaaaagcacaggggccgagcatatcttcttcgtccacgctca
ctttctaagtcaaaaaagaggaagttaaaccatggaaattgtagtagccccattcttctc
agtgatgacgaggagtctgaatccccatttgaagagggcacagacgctgatgactcgaca
cgagatgctgctcaaaaggacaaggttgatgacttggtgaaaaaggttgctgaaaaggaa
aaggctgatgactctgtgaaaaatgctgctcaaaaggacagaaagactcggaagaagtgt
attcttaaggatctcgactttgtgaagtttgttgttgattctattataaatgttgatgat
catgataaacttgcttctcctgaagggaaggaacagtttcctgtcaaagaaacacttccg
ttgatcttccggtttgaagacgaggatcctctcctccaggagaaagaagaatgggaaaaa
gaaatcgacaatttatttgctgaaatggacatgggtatcttagaatcatgcattggcttc
acaaatccatctttgggtgagaaagttagcggctgtcagatggggagccaccatcttatt
ttagatgaacaaattggactcatctgtaaagtttgttcacatgtgcatctggagagcaag
tacatctaccctgcttttgctgagagaacccgcgggaggcatgaaagaacgtatttcgga
gagtcgtcaccattcttcgatgttgacgggtttagatttgatgatccttctgcagtccat
gattctgctatttatgtggaaggaactgtgtgggatttagttcctctgcatgccaaagca
acaatgtatcctcatcaacgtgaaggatttgagttcatgtggaaaaatattgctggagat
atataccttgagaagctgagcgagcctttatctgctagtaggggaggatgcataatctca
catccacctggaaccggaaaaacccgtctgaccatagtatttcttcaggcatttctgaag
cagtttccaaagtgtcggcctgtaatcatagctccgcccaagttgctgtctaactgggaa
gtcgagttccagaaatgggaggcggacattcccttccacaacttgaacaacaatgatttc
tcgtgccaagaagatgaagtcacggttggtctctaccactgtttatcacgtgccggaaga
aaaaacaaacaccatatacgtatggtgaagctgaaatcctgggctaaaagtaagagtgta
ttggggatcagctatgacttgttcgagaagctcacgggagaatatggagatggttatgcc
aaagagattagagaaatacttctaacattacctggtcttgtagtccttgaagaagggcat
actcctcggaatgagcaaagccttctgtataaagctatgactaaggttgaaacgcagagg
cgcatacttttgtctggaactgtcttccagaataactttaaagagttgtacaacaccctc
cgcgtagttagtccaaagtttgctgcagaatctgagcagaaatgggcttctcttagcaat
tctattgacacgaattcccgagcattggaagagcttagggatatgattgcaccactaatc
catatatgtagtgaaaatgtgaagatgaaaagccttccgggtataagggacacactggta
tacttgaagcccacagatctgcagaagaagttgctcaatatgattccagagtatccaggc
tcatttgactttcgaaatatggtgtctctgatctctgttcatccttcattagtggcaaat
aagaaggtgttctctgacttagaaagtcagctaaatgaaagagaatgtcggttggatcca
aatactggagtgaaaacaaaatttgtcgttgaactaatccgactctgtgatggcatgaga
gagagggttatagtattcagccagttacttgatcctctaagactgatcaaggagcaactc
aattctctctttcactggactttaggccgagagattctatatatggatggggaacttgac
gtaaagcagcgccagaaatcaataagttctcttaatgatcctaagagtgatgcgaaagtg
ctgctcgcatcaataacggcctgttcggaaggaataaatcttataggggcctcacgagta
gttttgcttgatgttcactggaatccctcggtcgaacagcaagccgtcagtcgagcctac
aggaatggtcagactaaatttgtgcatgtttactgtccagtggcatcgaaatgggaggtt
aacaagatcgaacagcagacgaggaaaaaatatcattctggtgtacttttgtctaggaat
gaagtgaatacttgcaagacaaatccttcttgttctgtgcttgaggacaacatactagaa
tccatggttcagaatgagagtctccgtcatatttttgaagagctaccttatgaaccccgt
gcctatggctttagttcttgtaaccaaccttcaaaagcgagcatttag
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