Nicotiana tabacum (common tobacco): 107810461
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Entry
107810461 CDS
T04643
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107810461
03083 Polycomb repressive complex
107810461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107810461
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107810461
Histone modification proteins
HAT complexes
HATB complex
107810461
HDAC complexes
Sin3A-HDAC complex
107810461
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107810461
PRC2.2
107810461
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107810461
Heterochromatin formation proteins
Other heterochromatin formation proteins
107810461
Chromatin remodeling factors
NuRD complex
107810461
NuRF complex
107810461
NuRF complex (fruit fly)
107810461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_DCAF12
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
107810461
NCBI-ProteinID:
XP_016490735
UniProt:
A0A1S4BPE0
LinkDB
All DBs
Position
Un
AA seq
491 aa
AA seq
DB search
METTPSSQPKKRGRPKGSSTKTKEERDKEPHRMRGSITDKKAAANAIDEKYVQWKSLVPV
LYDWFANHNLVWPSLSCRWGPIVEQGALKNRQRLYLSEQTDKSVPNTLIIANCDVVKPRV
AAENHIANFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHTDGPEVLIWDIEAQ
PNKHAVYGAAASRPDLVLSGHQDNAEFALALCPMEPFVLSGGKDKTVVLWSIQDHISTLA
ADATKPAGSAGSIIKSADNPSIGPRGIFQGHEDTVEDVQFCPSSSQEFCSVGDDSCLILW
DARVGNNPVVKVCVAWVLFFNVYLVAGFNTXHVXLRSADNSVRLFDRRNLTSDGVGSPVH
KFEHHTAAVLCVQWCPDRASVFGSSAEDGLLNIWDYEKVGETTDTEAKSQDDPPPGLFFQ
HAGHRDKIVDFHWNASDPWTIVSVSDDLETSGGGGTLQIWRMSDLLYRPEEEVLAELQQF
KDHVSKCAPKP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaactccttcttctcagccaaagaagcgtgggaggccaaagggttcttcaacc
aaaaccaaagaggaaagagataaggagccccataggatgagaggtagtattactgataag
aaagctgctgctaatgctatcgacgagaaatatgttcagtggaagtcactcgtccctgtt
ctctacgactggttcgctaatcacaacctcgtttggccttccctctcttgcaggtggggt
ccaatagttgagcagggtgctttgaaaaaccgccagcgactctatctctctgaacagacg
gataagtcagtgcctaacactttgatcatagctaattgtgacgtggtgaagcccagggtt
gcagcagaaaatcacattgcaaatttcaatgaagaagcacgttcgccatttgtgaagaag
tacaaaaccataatacacccaggagaggttaacagaatcagagaactcccacaaaacaaa
aacatagtggcaacccatactgatggtcctgaagttctcatttgggacattgaagctcag
cccaataagcatgctgtctatggtgctgctgcttcgcgtccggatctggtattgagtggc
catcaagacaatgcagaatttgctctggcactgtgcccaatggaaccctttgtcctctct
ggaggaaaggacaaaactgtggtattgtggagcattcaagaccacatttcaacattggca
gcagatgcaaccaagcctgctggatcagctggctctataattaagtctgctgataatcca
tctattggtccacgtggtatcttccagggccatgaggatacagttgaagatgttcagttt
tgcccttcaagttcacaggaattttgtagtgttggtgatgattcatgcctcatattgtgg
gatgctcgagttggtaataatcctgttgtgaaggtatgcgttgcttgggtgcttttcttt
aatgtttatctagtggcagggtttaatacttagcatgtgtaactcagatccgctgataat
tcggtacgcttgtttgaccggcgaaatttaacttcggatggggttggatcaccggtccat
aagtttgaacatcacacagccgcagttctctgtgttcagtggtgtcctgatagggcttct
gtgtttgggagctccgcagaggatggcctcttaaatatttgggactacgagaaggttggt
gaaacaacagacactgaagcgaaatcgcaagatgatcctcctccaggcttattttttcag
catgctggacacagggataaaattgtggactttcactggaatgcatcggatccatggact
attgttagtgtatctgatgacttggagacctctggcggaggcggcacactacagatatgg
cgcatgagtgatttgttgtaccgaccagaggaggaagttttggctgagctgcaacagttc
aaggaccatgtgagcaagtgcgctcccaagccctaa
DBGET
integrated database retrieval system
