Nicotiana tabacum (common tobacco): 107811229
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Entry
107811229 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107811229
KO
K19022
AP-5 complex subunit beta-1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107811229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107811229
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
107811229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
HSF2BP_C
Motif
Other DBs
NCBI-GeneID:
107811229
NCBI-ProteinID:
XP_016491601
UniProt:
A0A1S4BRV6
LinkDB
All DBs
Position
24:109851229..109855930
Genome browser
AA seq
1131 aa
AA seq
DB search
MSSELKPLSPSEWENLIDDYNHGGVARLLRWTSTNYAAIPLFNLTLSSLLRKDLPHNLKL
QLLIFLEEQQYNNQNDVVSSTFPNRLLETLRSVIQSPNDGVSTSFALKEQFLISSTSIFI
NSVSFPLNSVNSSFITPFESLIELLLTIINRPNHSVDRQTRSIACECLRELEIAFPCLLC
EIGSHLWSLCQSERTHAGQSYVLLLVTVVYNIVKLKPHVSFSNSSSTLVPFTVPRFLVDE
NCKDEVFVGGELSDLSNRELRRVISFLFEWPQNLTPWGLLEFMDKSLPVAAALDLQGSLL
KVQFSGLLYTYDPLLWHAYLVMYLSFMDSFEGQELEIASRLLLLSKESQHHLSFRLLVLY
WLVGLIRLVLKRNVEKRKNVVDMSLSFYPSVFDPLALKSLKLDLLAYCSALMDNEKGVVS
AKGSSEMTKEKLLEDGLVCVSAFKWLPPWSMETSVAIRAIYKFLIGQSHSDNDSISNKIL
VEPTILHTVQRTLIDSLSEYRGLVPVIVGFTDRLLTCHKHRWLGERLLKTFDDHLLPKLK
IDYKLVSYFSILERIAESDKVSSIGLMEILTKFMAFLVEKHGPDTGLRSWGHGSKVLGIC
RTMILHQHSSKLFVGLSRLLSFTCLYFPDLEIRDNARIYLRMLICVPGKKLRDILNSGDQ
LPGISPSTHSSSFFSVQSPRISHDPKKSRSISSCMHLERVVPLLVKQSWSLSLSTLGLDA
KKPSYIEPIKDNVSPSEQSEFDKITDITVISEANRHSQPPEPLRVMDSKISQIVEILRKH
FSFIPDLRHMPGFKIKIPCALRFESEPFSRIWGINMLANGVDTLPALYATALKFSSAAPY
GSIPSCHIPFLLGQLPKSFYSFNQTNSLDIIPVENVSETSGDDKSFKAPVLIELEPQDPV
PGLVDVFIETNADNGQIIRGQLHNITVGIEDMFLKAIVPEDTPEDAVCRYYVDLFSALWE
ACGASTSTGRETFVLKGGKGVAAISGTRSVKLLEVPVASLIQAVERSLAPFVVCVTGDPL
TSLVKERGVIRDVEWNEVTLGTSSTDDTISESSIVGGPLYLKYKDDEDEGGGYVQISKKN
LGSIQILIFLPPRFHLLFQMEVSDTSTLVRIRTDHWPCLAYVDDYLEALFC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaactcaaacccttatcgccttcagaatgggaaaatctaatcgacgactac
aaccacggcggcgtagcacggctactccggtggacttccaccaactacgccgccattcct
ctctttaacctcacactttcatcactcctccgcaaagacctccctcacaatctcaaactc
caactcctcatcttcctcgaagaacaacaatacaacaaccaaaacgacgtcgtttcatcc
actttccctaaccgtctcctcgaaactctaagatcagtcatccaatcgccaaacgacggc
gtttcaacttcattcgcgctcaaagaacagttcctcatctcgtccacttcgattttcatc
aattccgttagtttcccgttaaattctgttaattcgagttttattactccgtttgaaagc
ttaattgagcttctgttgactattatcaaccggccgaatcatagcgttgaccgacaaacc
cggtcgatcgcctgtgaatgcttacgcgagttagaaattgcttttccttgtttactttgt
gaaattggatcacatctatggagtttgtgccaaagtgaacgtactcatgctggccaaagc
tatgtattattgttagttactgttgtttataacatcgtgaaattaaaacctcatgtatcg
tttagtaattcttcgagtacgttggttccgtttactgtaccgaggtttttagtagatgaa
aattgtaaagatgaggtttttgtagggggggagttatcagatttgagtaatagggagtta
aggagagtgatctcatttttgtttgaatggccgcaaaatttgactccatggggtctcttg
gagtttatggacaagtcattgccagttgctgcagctttagatttgcaggggtctttgttg
aaggttcagttttcagggttgctttatacgtacgatcctttgttatggcatgcttatttg
gtcatgtatttaagctttatggactcgttcgaagggcaagagttggaaatcgcgagtcga
ctcttgttgttatcgaaagaatctcagcatcatttgtctttccggttgctggtgctgtat
tggttagttggattgatacggttggtattgaagaggaatgtggagaaaaggaagaatgtc
gttgatatgagcttgagcttttatccgtcagtgtttgatccgcttgctttgaaatcattg
aagcttgacttgcttgcctattgttctgctttgatggataatgaaaaaggagtagtgagt
gcaaagggaagttcggaaatgactaaggagaagttacttgaagacggccttgtttgtgta
tcagcttttaaatggttgcctccttggagtatggagacttctgtggcaattcgtgctatc
tataagtttttgattgggcagtctcattcagacaatgattctatctccaataaaatccta
gtggagccaacgatcctccacactgtgcagagaacacttatagactctttatctgaatat
agaggattagttcctgtcattgttggttttactgaccgcttattgacatgtcacaagcac
cggtggttgggggaacgcctacttaagacatttgatgaccacttgcttccaaaactcaag
atagattacaaattggtatcttacttctctatattggaaaggattgctgagagtgataaa
gtttcttctattgggttaatggagatccttaccaagttcatggcatttcttgtcgaaaaa
catggtccagatacaggattaaggtcttggggtcacgggagtaaagttcttggaatttgt
cgaactatgatcctgcatcaacatagttccaaattatttgttgggttatctcgtctttta
tcattcacttgtctttatttcccagatctggagattcgtgacaatgccagaatttacctg
cggatgctgatttgtgttcctgggaaaaagctaagagacattctaaacagtggggaccag
cttcctggaatttctccatctactcattccagctctttcttcagtgttcagtctcctaga
atttctcacgaccctaagaaatccaggagtatttcatcctgcatgcatcttgagcgcgtg
gtgccattgttggttaaacaatcttggtctttgtccctgtcaactctgggacttgatgcc
aagaaacctagttatatagaacccatcaaggacaatgtgtccccaagtgagcaaagtgag
tttgacaaaattactgatattacggtgatctctgaagccaataggcacagtcagcctccg
gagccattacgtgttatggattcaaagatttcgcagattgttgaaatcttgaggaagcat
ttttcatttattcccgacttaagacacatgccaggtttcaagattaaaataccttgtgct
ctaaggtttgagtcagagcctttcagtcgcatttggggaatcaatatgctagctaatgga
gttgacacccttcctgccttatatgcaactgcgctcaagttctcttctgctgcgccatac
ggctctattccatcatgccacattccttttcttctaggtcaactccccaaaagtttctat
tcgtttaaccagacaaattcccttgatattatccctgtggagaatgtatctgaaacttct
ggagatgacaaaagcttcaaagctcctgttctgattgaattggaaccacaggatccagta
cctggtcttgttgatgttttcattgaaacaaatgcggacaatggtcagatcattagagga
cagctgcataacattacagtaggaattgaagatatgtttctcaaagctattgttccagaa
gacacgcctgaagatgcagtatgtcgatattatgtggatctgtttagtgccttgtgggaa
gcatgtggtgcatcaaccagcactgggcgggagacatttgtacttaaaggaggtaaaggg
gttgcagcaatcagtggtactcgctccgtgaagctactggaggttcctgtggcatctttg
atccaagccgtagagcgatccttggcaccttttgttgtatgtgtaaccggtgatcctcta
accagcctcgtgaaggagagaggagttataagggatgttgaatggaatgaggtgactttg
ggtacctcttccactgatgataccatctcagaatctagtatagttggggggcccctttac
ctcaagtacaaggatgatgaagatgagggagggggttatgtccaaattagtaagaaaaac
cttggatcaattcagatcttaatattccttccaccaagatttcatctcctttttcagatg
gaggtttctgatacttctacattagtccgaattagaacggatcactggccatgccttgct
tatgttgatgactatttggaagctttattttgctaa
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