KEGG   Nicotiana tabacum (common tobacco): 107811264
Entry
107811264         CDS       T04643                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04120  Ubiquitin mediated proteolysis
nta04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107811264
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107811264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107811264
Enzymes [BR:nta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107811264
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107811264
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107811264
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 WD40_like Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 eIF2A
Other DBs
NCBI-GeneID: 107811264
NCBI-ProteinID: XP_016491637
UniProt: A0A1S4BRX3
LinkDB
Position
Un
AA seq 520 aa
MWYFCQFQQCSLCNNFMGRRCACMTMTITISSTVENDLQFIKEDISAVEKHRMELYRARG
RYAAKMRMLVNDSSAVTIRPSLIDKQGSGIISGSSISQRQGYAASDTSQNRKTDARALEN
VHRTDSDSQNSDQSGLATARKRSIYAQLDDIQGYYLQKRRHCTKQSHRQEETVANVINRE
GYCAGLEDFQSVLSTFTQYSRLRVVAELRPVDLFHSANIVSSIEFDRDDEFFATAGVSRR
IKVFDFSSVVNEPADAQRPVVEMSSRSKLSCLSWNKYAKNHIASSDYEGIVTIWDVSSRQ
SVVEYEEHEKRAWSVDFSHTDPSMLVSGSDDCKVKVWCTKQEASVISIDMKANICSVKYN
PQSSFHIAVGSADNHIHYYDLRNIKQPLHIFCGHHKSVSYVKFLSNNELASASTDGTLRL
WDVKENIPLRNYRGHTNEKNFVGLAVNSEYIACGSETNEVFVYHKAISKPAASHKFDSDQ
NDPDEDMGSHFISSVCWKRESPTILTANSQGIVQVLVLTA
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtggtacttttgccaatttcaacaatgttctctttgcaataacttcatgggaaggaga
tgtgcatgtatgactatgactatcactatatcttcaacagttgaaaatgatctccagttc
attaaagaagatataagtgctgtggagaaacatagaatggaattgtatagggcaaggggt
agatatgcagcaaagatgagaatgctagtaaatgattcttctgctgtgacaattcggcct
tcattgatagataagcaaggtagtggcattatttctggttcctcaatttcacagcgacaa
ggatatgctgcttcagacacttcacagaacaggaaaacagatgcaagagctctagagaat
gttcacaggacagattccgactcacagaattctgatcaatctggacttgcgacagcaaga
aagagaagtatctacgcacagctcgatgatatacaaggttattatttgcaaaaacggcga
cactgcacaaaacagtcacatagacaggaagaaacggtagcaaacgtcataaacagagaa
ggttattgtgccggacttgaggattttcaatctgttctatctacctttacacaatacagt
cggttgcgggttgttgctgaacttaggcctgtcgatcttttccactcagctaatattgtc
tcaagtattgaatttgatcgagatgatgaattttttgctacagctggcgtgtcgagaaga
atcaaggtctttgacttttcatcagtggtaaatgaaccagctgatgcacaacgtcctgtt
gttgaaatgtcttcacgatccaaacttagttgtctgagctggaacaagtacgcaaagaac
cacattgcgagcagtgactatgaaggcatagtaaccatttgggatgtgagcagtcgccag
agtgtggtggagtatgaggagcatgaaaaacgagcatggagtgttgatttctctcatact
gatccttctatgcttgtgtctggcagtgatgattgcaaggtcaaagtttggtgcacgaag
caggaggcaagtgttattagcattgacatgaaagcaaacatttgctctgtgaagtacaat
cctcaatccagctttcatatagctgtgggttctgctgataatcatatccattattatgac
ttgagaaatattaagcagccgctgcatattttctgtggacaccataaatctgtttcatat
gtgaaatttttatccaacaatgagctggcgtctgcatcaacggatggtacattgcgtttg
tgggatgtcaaggagaacattccactgcgaaattatagaggacatacaaacgagaagaac
tttgtgggtcttgcagtaaacagtgaatacattgcctgtggcagtgaaacaaatgaagtg
tttgtctatcacaaggcgatttctaagccagcagcatcgcacaaatttgattctgaccag
aatgatccagatgaggacatgggatcacatttcattagttctgtttgttggaagcgcgag
agcccaaccattttaacagcaaatagtcaagggatcgtacaagtgcttgttcttactgct
tga

DBGET integrated database retrieval system