Nicotiana tabacum (common tobacco): 107811290
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Entry
107811290 CDS
T04643
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107811290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107811290
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107811290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DZR
DUF1258
Zn_ribbon_3
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
107811290
NCBI-ProteinID:
XP_016491674
UniProt:
A0A1S4BS09
LinkDB
All DBs
Position
Un
AA seq
538 aa
AA seq
DB search
MSIDLVLKPSCSRCGSTSELYGSTCKHLTLCMSCGKNMAETRDKCYECGAPITRLIREYN
VRACSSNDKNYFIARFASGLPNFSKKKNESKWTLQKEGLQGRQVTDTLREKYKNKPWLLE
DETGQFQFHGQLEGAQSAQYYLLMMQGEELVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYQRWMMKAANNGPAAFGEVERSDDKESGSGGTRGRKKTSGDEEEGNGSDHGD
EDEEEEAARKSRLGLNKRGADDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEIPAPPEIKQDDEDEDEGDEEGGGLSKSGKELKKLLGKANGLNESDADDD
DDDDDTEEDISPVLAPKPKEAPKEEPIDNSSPSKPSASGPTRGTPTSKSAKTKRKANVDD
SKPTNGAPLKKVKTETDAKPGKDETPSTAKNSVLPKGASPSSKTAPSPATGPVTEEEIRA
VLLQRKPVTTQDLVSQFKSRLKCKEDKAAFADVLRKISKIQKTGTGTSYVVLRERTNQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagatttggtactgaaaccgtcgtgtagcaggtgcggctccacgtcggagttg
tacggaagcacctgcaagcacttgactctttgcatgtcttgtggtaaaaacatggctgag
actcgtgataaatgttatgagtgtggcgctccgatcacacgactgattcgagagtataat
gttcgggcttgctccagcaatgacaagaattatttcattgctcgatttgcttcaggctta
ccgaacttttcaaaaaagaagaatgagagtaaatggactttacaaaaagaaggtttgcaa
ggacgtcaagttacggatactttgcgggaaaagtacaagaataaaccatggctattagag
gatgaaaccggtcaatttcagttccatggtcagcttgagggagcacagtctgcacaatat
tatctattgatgatgcagggtgaagagttggttgctattccagctggttcttggtacaac
tttaacaaagttgcccaatataagcaacttactctggaggaagcagaggagaaaatgaaa
aatagaaggaaaactgcagatgggtaccagagatggatgatgaaagcagcaaataatgga
cctgctgccttcggtgaagtagaaagatctgatgacaaggaaagtggatctggtgggaca
agggggcgtaagaaaacttctggtgatgaggaggaaggcaacggttcggaccatggggat
gaagatgaggaagaggaggctgctagaaaaagcaggttgggactcaacaaaagaggcgct
gatgatgatgaagagggtcctagagggggtgatcttgacctggatgatgatgatattgaa
aaaggggatgattgggagcatgaagagatttttacggatgatgatgaagctgttgggaat
gatcctgaggagagggaagatttggctcctgaaattcctgctcctcctgagattaagcag
gatgacgaagacgaggatgaaggtgatgaagagggagggggtctgagtaaatctggtaaa
gagctgaaaaagttgcttggaaaagctaatggattgaatgaatcagatgctgatgatgac
gatgatgacgatgatacagaagaggatatttcacctgtattagctcctaagccgaaggaa
gctcccaaagaagaaccgatcgacaacagcagtccttcgaaaccatctgcttctggaccc
actcgtggaactccaacttcaaaatcagctaagactaaaagaaaagctaatgttgatgac
tcaaaaccaaccaatggtgctcccttgaaaaaagtgaaaacagaaacggatgccaaacct
gggaaagatgaaactccgtctactgcgaagaacagtgttctcccaaagggtgcatcaccc
tcttccaaaactgctccaagtcctgccacaggtcctgttactgaagaagaaattagagct
gttctattgcagagaaaaccagtgaccacacaggatcttgtcagccaatttaaatctcgt
ttaaaatgtaaagaggataaggctgcttttgctgatgtattgaggaagatctccaagata
cagaagaccggtacaggaacaagctatgttgtgttacgagagaggacaaatcaatag
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